Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 0.0e+00 2496.8 1325 100.0
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 0.0e+00 2288.8 1332 91.7
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 0.0e+00 1419.1 1274 59.5
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 0.0e+00 1394.8 1270 58.3
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 0.0e+00 1393.6 1270 58.9
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1391.3 1271 57.7
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1389.4 1269 57.5
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 0.0e+00 1388.6 1268 58.3
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 0.0e+00 1380.2 1270 57.6
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 0.0e+00 1363.6 1271 56.7
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1361.3 1271 56.6
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 0.0e+00 1360.5 1382 53.9
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 0.0e+00 1357.8 1260 57.5
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 0.0e+00 1353.2 1263 57.0
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 0.0e+00 1343.9 1289 55.6
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1337.4 1269 55.9
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 0.0e+00 1327.4 1271 55.8
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 0.0e+00 1327.4 1271 56.0
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1321.2 1269 55.9
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 0.0e+00 1311.2 1271 55.3
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 0.0e+00 1310.0 1040 65.5
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 0.0e+00 1302.7 1267 55.8
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 0.0e+00 1297.0 1268 54.8
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 0.0e+00 1281.2 1135 59.0
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 0.0e+00 1280.8 1276 54.2
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 0.0e+00 1252.7 1275 53.5
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 0.0e+00 1250.3 1270 53.1
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 0.0e+00 1243.4 1270 53.3
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 0.0e+00 1238.0 1270 52.4
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 0.0e+00 1228.4 1163 56.6
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 0.0e+00 1226.8 1153 57.1
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1225.7 1141 56.4
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 0.0e+00 1224.9 1276 52.6
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 0.0e+00 1215.3 1269 51.6
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 0.0e+00 1212.6 1268 51.6
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 0.0e+00 1204.1 1268 52.4
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1200.7 1265 51.4
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 0.0e+00 1196.8 1298 52.5
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 0.0e+00 1195.6 1059 58.5
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1182.5 1264 50.9
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 0.0e+00 1182.2 1305 50.6
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 0.0e+00 1182.2 1267 51.1
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 0.0e+00 1179.5 1265 51.3
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 0.0e+00 1178.7 1274 51.5
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 0.0e+00 1177.9 1273 51.7
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 0.0e+00 1173.7 1272 49.8
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 0.0e+00 1156.7 1278 49.1
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 0.0e+00 1146.3 1273 48.5
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 0.0e+00 1144.4 1265 50.0
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1141.3 1280 49.6
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 0.0e+00 1140.2 1272 48.6
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 0.0e+00 1138.3 1272 48.7
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 0.0e+00 1135.2 1188 52.3
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1130.9 1277 49.9
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1129.8 1270 49.0
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 0.0e+00 1127.5 1271 48.7
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 0.0e+00 1126.3 1270 49.2
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 0.0e+00 1109.4 1270 48.0
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 0.0e+00 1108.2 1276 48.8
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 0.0e+00 1107.4 1134 52.8
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 0.0e+00 1104.0 1300 48.2
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 0.0e+00 1103.2 1279 47.5
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 0.0e+00 1100.5 1310 46.7
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 0.0e+00 1094.0 1267 47.6
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 0.0e+00 1091.3 1280 47.3
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 0.0e+00 1091.3 1280 47.3
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 0.0e+00 1088.6 1281 47.2
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 0.0e+00 1088.2 1271 47.1
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 0.0e+00 1082.0 1278 46.7
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 9.9e-309 1063.9 1161 49.8
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.2e-306 1057.0 1278 46.9
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 7.3e-304 1047.7 1210 46.7
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 1.1e-302 1043.9 1278 46.5
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 2.4e-302 1042.7 1259 45.8
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 1.7e-300 1036.6 1264 46.4
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 5.4e-299 1031.6 866 62.8
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 5.4e-299 1031.6 1099 51.0
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 6.9e-294 1014.6 1065 52.9
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 3.4e-293 1012.3 1279 45.3
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 2.3e-289 999.6 1279 44.9
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 2.1e-287 993.0 1264 44.6
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 7.6e-285 984.6 1268 45.5
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 4.3e-280 968.8 881 58.3
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 1.2e-277 960.7 1212 44.7
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 1.8e-273 946.8 1242 44.3
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 1.7e-263 913.7 757 61.7
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 1.2e-250 870.9 1117 43.3
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 1.0e-249 867.8 1212 42.7
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.2e-247 860.1 976 49.3
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 9.1e-238 828.2 844 50.9
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 4.4e-232 809.3 1154 41.2
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 3.4e-224 783.1 796 51.0
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 6.6e-220 768.8 769 54.6
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 4.6e-205 719.5 1010 39.6
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 7.1e-198 695.7 1333 34.7
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 3.1e-177 627.1 1020 38.8
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 9.3e-166 589.0 718 47.8
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 2.7e-157 560.8 637 49.3
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 4.6e-157 560.1 586 52.0
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 1.5e-147 528.5 655 46.0
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 2.5e-142 511.1 1235 30.4
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 6.8e-124 449.9 464 56.0
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 9.1e-121 439.5 452 54.6
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 3.3e-102 377.9 610 41.0
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 6.2e-101 373.6 378 57.7
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 5.2e-100 370.5 464 48.5
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 5.6e-94 350.5 1254 25.9
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 6.2e-93 347.1 357 49.3
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 5.4e-89 334.0 1321 24.8
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 4.0e-84 317.8 394 44.9
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 7.6e-83 313.5 389 42.2
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 2.2e-82 312.0 459 42.7
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.5e-78 299.3 383 44.4
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 4.2e-57 228.0 291 41.9
Psat0s1368g0040 Pisum sativum HOM05D005651 ORTHO05D006877 8.2e-45 187.2 192 52.6
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 3.1e-36 158.7 139 61.2
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 5.0e-34 151.4 178 50.0
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 1.6e-27 129.8 116 58.6
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 4.5e-27 128.3 128 56.2
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 1.2e-24 120.2 151 49.7
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 3.0e-23 115.5 208 32.2
CBR_g39378 Chara braunii HOM05D005651 ORTHO05D006877 2.4e-20 105.9 509 22.4
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 3.1e-20 105.5 117 51.3
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 3.8e-18 98.6 116 50.9
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 2.7e-16 92.4 103 50.5
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 1.0e-15 90.5 116 44.0
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 3.4e-14 85.5 112 45.5
TPR.G28787 Trifolium pratense HOM05D005651 ORTHO05D006877 2.8e-13 82.4 71 56.3
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 1.4e-12 80.1 104 45.2
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 2.0e-11 76.3 65 58.5
SHI01042 Sapria himalayana HOM05D005651 ORTHO05D006877 1.0e-10 73.9 68 57.4


User provided reference genes

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