Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 6.1e-83 310.8 165 100.0
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.0e-57 226.1 168 78.6
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 1.4e-47 193.4 162 69.1
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.4e-47 192.6 166 70.5
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 7.6e-33 144.4 146 59.6
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 5.4e-31 138.3 154 54.5
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.6e-30 135.2 153 58.2
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.7e-29 133.3 152 57.9
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.5e-28 129.4 146 54.8
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 9.6e-28 127.5 158 55.1
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 9.6e-28 127.5 147 53.1
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-27 127.1 152 56.6
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 2.1e-27 126.3 153 51.0
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.6e-27 125.6 152 55.9
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 1.8e-26 123.2 124 57.3
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 2.4e-26 122.9 157 49.7
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 3.1e-26 122.5 161 45.3
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.2e-25 120.6 158 47.5
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.6e-25 119.4 153 49.7
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.3e-24 117.1 145 49.7
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 1.7e-24 116.7 145 49.0
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 2.9e-24 115.9 145 51.0
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.1e-23 114.0 156 47.4
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 4.2e-23 112.1 152 46.7
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 7.1e-23 111.3 175 42.9
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.3e-23 110.9 110 61.8
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 2.7e-22 109.4 168 42.9
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 4.6e-22 108.6 163 41.1
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 1.0e-21 107.5 150 48.0
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 1.0e-21 107.5 168 38.7
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 5.1e-21 105.1 147 42.9
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 1.1e-20 104.0 160 42.5
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 1.1e-20 104.0 161 41.0
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 3.3e-20 102.4 111 52.3
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 3.3e-20 102.4 152 44.7
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 3.3e-20 102.4 166 40.4
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 4.3e-20 102.1 153 46.4
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 7.4e-20 101.3 148 50.0
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 9.6e-20 100.9 161 39.8
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-19 100.5 172 39.0
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.6e-19 100.1 172 37.8
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 2.1e-19 99.8 154 41.6
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.8e-19 99.4 149 42.3
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 3.6e-19 99.0 166 39.8
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 4.8e-19 98.6 152 42.8
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 1.1e-18 97.4 146 41.1
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.8e-18 96.7 159 42.8
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 1.8e-18 96.7 160 41.2
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 1.8e-18 96.7 151 45.0
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 2.4e-18 96.3 169 40.8
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 2.4e-18 96.3 169 39.1
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 2.4e-18 96.3 151 40.4
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 2.4e-18 96.3 146 41.8
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.1e-18 95.9 155 43.9
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 4.0e-18 95.5 158 39.9
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.9e-18 94.7 162 41.4
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.9e-18 94.7 155 43.2
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 6.9e-18 94.7 162 39.5
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 9.0e-18 94.4 163 37.4
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 9.0e-18 94.4 155 43.9
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-17 94.0 158 42.4
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.2e-17 94.0 169 40.2
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 1.5e-17 93.6 144 42.4
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 1.5e-17 93.6 148 42.6
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.5e-17 93.6 156 39.1
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 2.0e-17 93.2 150 44.7
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.6e-17 92.8 138 45.7
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 2.6e-17 92.8 157 42.0
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.6e-17 92.8 169 39.1
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 3.4e-17 92.4 146 45.2
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 3.4e-17 92.4 146 45.2
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 4.5e-17 92.0 167 39.5
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 7.6e-17 91.3 169 39.1
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 7.6e-17 91.3 145 41.4
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 9.9e-17 90.9 163 39.9
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.9e-17 90.9 163 39.9
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 1.3e-16 90.5 160 40.0
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 1.7e-16 90.1 154 42.9
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 3.8e-16 89.0 120 46.7
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 3.8e-16 89.0 146 43.8
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 4.9e-16 88.6 163 39.3
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 4.9e-16 88.6 149 41.6
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 6.4e-16 88.2 150 42.0
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 1.1e-15 87.4 146 43.2
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.4e-15 87.0 147 40.8
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 1.4e-15 87.0 117 50.4
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 1.9e-15 86.7 146 41.8
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 1.9e-15 86.7 146 38.4
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 3.2e-15 85.9 147 40.8
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 3.2e-15 85.9 118 47.5
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 4.2e-15 85.5 111 45.0
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 4.2e-15 85.5 155 39.4
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 5.5e-15 85.1 146 38.4
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 9.3e-15 84.3 151 39.1
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 1.2e-14 84.0 145 40.7
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 2.1e-14 83.2 147 41.5
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 2.1e-14 83.2 147 41.5
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 2.1e-14 83.2 150 41.3
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 2.1e-14 83.2 106 44.3
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.7e-14 82.8 162 38.3
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 2.7e-14 82.8 145 43.4
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 3.5e-14 82.4 144 38.9
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 3.5e-14 82.4 143 43.4
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 4.6e-14 82.0 148 42.6
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 4.6e-14 82.0 148 42.6
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 4.6e-14 82.0 150 41.3
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 4.6e-14 82.0 169 37.9
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 6.0e-14 81.6 150 41.3
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 6.0e-14 81.6 151 37.1
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 7.9e-14 81.3 165 33.9
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 3.0e-13 79.3 113 41.6
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 3.9e-13 79.0 151 37.7
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 6.7e-13 78.2 139 39.6
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.3e-12 75.9 102 45.1
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 4.3e-12 75.5 146 38.4
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 4.3e-12 75.5 146 38.4
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 5.6e-12 75.1 145 40.7
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 5.6e-12 75.1 181 34.3
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 7.4e-12 74.7 166 38.0
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 7.4e-12 74.7 149 37.6
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 9.6e-12 74.3 95 47.4
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.6e-12 74.3 100 42.0
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 1.6e-11 73.6 147 39.5
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 1.6e-11 73.6 147 39.5
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 2.1e-11 73.2 142 40.1
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 2.1e-11 73.2 100 45.0
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 2.8e-11 72.8 112 42.9
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 3.7e-11 72.4 141 38.3
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 3.7e-11 72.4 148 35.8
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 4.8e-11 72.0 89 50.6
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 4.8e-11 72.0 152 34.2
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 2.0e-09 66.6 147 38.1
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 2.0e-09 66.6 147 38.1
Zm00001eb432720 Zea mays HOM05D005211 ORTHO05D006148 2.6e-09 66.2 166 33.1
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 1.0e-08 64.3 108 38.9
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 1.3e-08 63.9 88 46.6
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 2.2e-08 63.2 159 35.8
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 1.1e-07 60.8 151 33.8
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 2.5e-07 59.7 90 43.3
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 5.5e-07 58.5 121 33.9
Dinv44235 Davidia involucrata HOM05D005211 ORTHO05D006148 7.1e-07 58.2 70 48.6
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 7.1e-07 58.2 140 33.6
BcaC02g07205 Brassica carinata HOM05D005211 ORTHO05D006148 9.3e-07 57.8 90 44.4
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 2.7e-06 56.2 137 33.6
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 6.0e-06 55.1 138 29.7


User provided reference genes

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