Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0175400 Salix brachista HOM05D008160 ORTHO05D009635 4.3e-72 274.6 145 100.0
Potri.002G229300 Populus trichocarpa HOM05D008160 ORTHO05D009635 4.3e-40 168.3 153 66.0
Potri.014G153200 Populus trichocarpa HOM05D008160 ORTHO05D009635 1.9e-32 142.9 154 57.8
Thecc.02G314100 Theobroma cacao HOM05D008160 ORTHO05D009635 1.1e-14 84.0 155 41.9
QL06p012138 Quercus lobata HOM05D008160 ORTHO05D009635 5.3e-14 81.6 156 39.7
QL08p033125 Quercus lobata HOM05D008160 ORTHO05D009635 5.3e-14 81.6 156 39.7
MD09G1108700 Malus domestica HOM05D008160 ORTHO05D009635 1.0e-12 77.4 154 38.3
CiPaw.03G160200 Carya illinoinensis HOM05D008160 ORTHO05D009635 3.8e-12 75.5 150 38.7
Gorai.005G149800 Gossypium raimondii HOM05D008160 ORTHO05D009635 3.8e-12 75.5 157 36.3
Gohir.D02G133900 Gossypium hirsutum HOM05D008160 ORTHO05D009635 5.0e-12 75.1 158 36.1
Manes.12G074700 Manihot esculenta HOM05D008160 ORTHO05D009635 5.0e-12 75.1 148 42.6
TAR624G1256 Trochodendron aralioides HOM05D008160 ORTHO05D009635 5.0e-12 75.1 151 35.1
TAR626G0785 Trochodendron aralioides HOM05D008160 ORTHO05D009635 5.0e-12 75.1 149 37.6
TWI75G1754 Tripterygium wilfordii HOM05D008160 ORTHO05D009635 6.5e-12 74.7 153 35.9
Dinv05432 Davidia involucrata HOM05D008160 ORTHO05D009635 1.9e-11 73.2 137 41.6
TPR.G4649 Trifolium pratense HOM05D008160 ORTHO05D009635 4.2e-11 72.0 143 30.8
Gohir.A03G108800 Gossypium hirsutum HOM05D008160 ORTHO05D009635 5.5e-11 71.6 157 35.7
Glyma.12G099100 Glycine max HOM05D008160 ORTHO05D009635 1.2e-10 70.5 151 37.1
Gohir.D13G088500 Gossypium hirsutum HOM05D008160 ORTHO05D009635 1.2e-10 70.5 147 35.4
Gohir.A13G094500 Gossypium hirsutum HOM05D008160 ORTHO05D009635 1.6e-10 70.1 147 36.1
Haze_12867 Corylus avellana HOM05D008160 ORTHO05D009635 2.1e-10 69.7 98 42.9
Cfa014402 Carpinus fangiana HOM05D008160 ORTHO05D009635 6.1e-10 68.2 162 32.7
TWI36G0727 Tripterygium wilfordii HOM05D008160 ORTHO05D009635 6.1e-10 68.2 151 38.4
FvH4_6g43200 Fragaria vesca HOM05D008160 ORTHO05D009635 1.0e-09 67.4 153 35.3
Nn1g03539 Nelumbo nucifera HOM05D008160 ORTHO05D009635 1.0e-09 67.4 148 30.4
Medtr4g048060 Medicago truncatula HOM05D008160 ORTHO05D009635 2.3e-09 66.2 149 31.5
Prupe.3G217400 Prunus persica HOM05D008160 ORTHO05D009635 2.3e-09 66.2 151 34.4
FAN02G3260 Fragaria x ananassa HOM05D008160 ORTHO05D009635 3.0e-09 65.9 153 33.3
COL.COLO4_27706 Corchorus olitorius HOM05D008160 ORTHO05D009635 5.1e-09 65.1 152 33.6
FAN09G3148 Fragaria x ananassa HOM05D008160 ORTHO05D009635 5.1e-09 65.1 153 34.0
Glyma.06G305400 Glycine max HOM05D008160 ORTHO05D009635 5.1e-09 65.1 151 35.1
Lj3g0006762 Lotus japonicus HOM05D008160 ORTHO05D009635 6.7e-09 64.7 150 32.7
Psat7g157360 Pisum sativum HOM05D008160 ORTHO05D009635 6.7e-09 64.7 143 28.7
TPR.G4242 Trifolium pratense HOM05D008160 ORTHO05D009635 1.5e-08 63.5 150 32.0
CANSAT64G2131 Cannabis sativa HOM05D008160 ORTHO05D009635 2.0e-08 63.2 162 32.7
Ca_26933_v3 Cicer arietinum L. HOM05D008160 ORTHO05D009635 2.5e-08 62.8 143 28.7
CsaV3_2G034970 Cucumis sativus L. HOM05D008160 ORTHO05D009635 4.3e-08 62.0 145 33.1
Gorai.013G101200 Gossypium raimondii HOM05D008160 ORTHO05D009635 4.3e-08 62.0 147 34.0
CiPaw.04G116300 Carya illinoinensis HOM05D008160 ORTHO05D009635 9.7e-08 60.8 152 35.5
FAN10G1253 Fragaria x ananassa HOM05D008160 ORTHO05D009635 9.7e-08 60.8 153 32.7
FAN14G2424 Fragaria x ananassa HOM05D008160 ORTHO05D009635 9.7e-08 60.8 153 32.7
Sed0017088 Sechium edule HOM05D008160 ORTHO05D009635 9.7e-08 60.8 142 30.3
ClCG02G008690 Citrullus lanatus HOM05D008160 ORTHO05D009635 1.3e-07 60.5 154 33.1
RcHm_v2.0_Chr2g0159311 Rosa chinensis HOM05D008160 ORTHO05D009635 1.7e-07 60.1 153 34.0
RcHm_v2.0_Chr2g0159421 Rosa chinensis HOM05D008160 ORTHO05D009635 2.2e-07 59.7 152 34.9
Ciclev10017235m.g Citrus clementina HOM05D008160 ORTHO05D009635 2.8e-07 59.3 73 47.9
Lalb_Chr19g0135851 Lupinus albus HOM05D008160 ORTHO05D009635 2.8e-07 59.3 146 30.8
Eucgr.A01130 Eucalyptus grandis HOM05D008160 ORTHO05D009635 1.1e-06 57.4 121 32.2
Ca_01599_v3 Cicer arietinum L. HOM05D008160 ORTHO05D009635 1.8e-06 56.6 135 31.1
MELO3C019266.2 Cucumis melo HOM05D008160 ORTHO05D009635 6.9e-06 54.7 147 32.0
Glyma.13G308600 Glycine max HOM05D008160 ORTHO05D009635 6.9e-06 54.7 148 31.8
Hma1.2p1_0328F.1_g126920 Hydrangea macrophylla HOM05D008160 ORTHO05D009635 6.9e-06 54.7 68 45.6
C03p51830 Brassica napus HOM05D010757 ORTHO05D009635 9.1e-06 54.3 107 32.7
CARHR097620 Cardamine hirsuta HOM05D010757 ORTHO05D009635 9.1e-06 54.3 116 33.6


User provided reference genes

Program Settings