Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0164700 Salix brachista HOM05D008325 ORTHO05D010336 5.7e-59 230.7 117 100.0
Potri.002G190800 Populus trichocarpa HOM05D008325 ORTHO05D010336 4.8e-42 174.5 118 81.4
Atru.chr5.921 Acer truncatum HOM05D008325 ORTHO05D010336 1.3e-23 113.2 134 57.5
Duzib133G0176 Durio zibethinus HOM05D008325 ORTHO05D010336 1.1e-22 110.2 105 58.1
Duzib138G1904 Durio zibethinus HOM05D008325 ORTHO05D010336 1.1e-22 110.2 122 54.1
COL.COLO4_23173 Corchorus olitorius HOM05D008325 ORTHO05D010336 3.3e-22 108.6 109 60.6
Duzib211G0526 Durio zibethinus HOM05D008325 ORTHO05D010336 1.8e-20 102.8 109 56.9
QL12p033939 Quercus lobata HOM05D008325 ORTHO05D010336 2.0e-19 99.4 119 50.4
Manes.01G232100 Manihot esculenta HOM05D008325 ORTHO05D010336 4.4e-19 98.2 119 53.8
QL12p034783 Quercus lobata HOM05D008325 ORTHO05D010336 1.3e-18 96.7 117 51.3
Gohir.A12G122200 Gossypium hirsutum HOM05D008325 ORTHO05D010336 3.7e-18 95.1 126 48.4
TAR365G0423 Trochodendron aralioides HOM05D008325 ORTHO05D010336 1.1e-17 93.6 108 52.8
Gohir.A08G039900 Gossypium hirsutum HOM05D008325 ORTHO05D010336 4.1e-17 91.7 104 50.0
Dinv12107 Davidia involucrata HOM05D008325 ORTHO05D010336 5.4e-17 91.3 100 50.0
Gohir.D12G125800 Gossypium hirsutum HOM05D008325 ORTHO05D010336 9.2e-17 90.5 124 48.4
Gorai.008G136800 Gossypium raimondii HOM05D008325 ORTHO05D010336 9.2e-17 90.5 124 48.4
Dinv33149 Davidia involucrata HOM05D008325 ORTHO05D010336 2.7e-16 89.0 95 54.7
Gohir.D08G050000 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.0e-15 87.0 104 49.0
Gorai.004G049600 Gossypium raimondii HOM05D008325 ORTHO05D010336 1.0e-15 87.0 104 49.0
Thecc.01G320800 Theobroma cacao HOM05D008325 ORTHO05D010336 1.7e-15 86.3 109 52.3
Ciclev10022863m.g Citrus clementina HOM05D008325 ORTHO05D010336 7.3e-14 80.9 136 41.9
Nn4g25439 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.2e-13 80.1 97 46.4
Actinidia21366 Actinidia chinensis HOM05D008325 ORTHO05D010336 3.6e-13 78.6 95 48.4
CiPaw.08G085200 Carya illinoinensis HOM05D008325 ORTHO05D010336 6.2e-13 77.8 128 43.0
Oeu038060.1 Olea europaea HOM05D008325 ORTHO05D010336 1.4e-12 76.6 126 38.9
Oeu009100.1 Olea europaea HOM05D007843 ORTHO05D003639 5.2e-12 74.7 110 38.2
Manes.05G011600 Manihot esculenta HOM05D008325 ORTHO05D010336 1.2e-11 73.6 120 44.2
Cpa.g.sc1096.2 Carica papaya HOM05D008325 ORTHO05D010336 1.5e-11 73.2 78 52.6
Nn3g21851 Nelumbo nucifera HOM05D008325 ORTHO05D010336 3.4e-11 72.0 122 41.0
Gohir.D11G112050 Gossypium hirsutum HOM05D008325 ORTHO05D010336 2.9e-10 68.9 63 54.0
CiPaw.07G122000 Carya illinoinensis HOM05D008325 ORTHO05D010336 6.4e-10 67.8 121 43.0
ClCG09G004800 Citrullus lanatus HOM05D023270 ORTHO05D010336 1.1e-09 67.0 132 36.4
TAR633G0021 Trochodendron aralioides HOM05D008325 ORTHO05D010336 1.4e-09 66.6 67 50.7
Gohir.A11G107100 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.9e-09 66.2 63 52.4
Gorai.007G120300 Gossypium raimondii HOM05D008325 ORTHO05D010336 1.9e-09 66.2 109 41.3
CSS0037105 Camellia sinensis var. sinensis HOM05D008325 ORTHO05D010336 3.2e-09 65.5 89 44.9
Nn4g25441 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.2e-08 63.5 123 41.5
Lj5g0017973 Lotus japonicus HOM05D008325 ORTHO05D010336 1.6e-08 63.2 107 39.3
VMungo1383G3369 Vigna mungo HOM05D008325 ORTHO05D010336 1.6e-08 63.2 114 40.4
Actinidia37695 Actinidia chinensis HOM05D008325 ORTHO05D010336 2.1e-08 62.8 107 40.2
Nn3g21852 Nelumbo nucifera HOM05D008325 ORTHO05D010336 2.7e-08 62.4 105 41.0
Glyma.02G009500 Glycine max HOM05D008325 ORTHO05D010336 6.0e-08 61.2 112 35.7
Phvul.001G215800 Phaseolus vulgaris HOM05D008325 ORTHO05D010336 3.9e-07 58.5 95 37.9
Glyma.03G222400 Glycine max HOM05D008325 ORTHO05D010336 8.6e-07 57.4 109 35.8
Glyma.19G219600 Glycine max HOM05D008325 ORTHO05D010336 2.5e-06 55.8 123 35.8
Sed0013744 Sechium edule HOM05D023270 ORTHO05D010336 2.5e-06 55.8 108 35.2
Sed0014576 Sechium edule HOM05D023270 ORTHO05D010336 2.5e-06 55.8 126 38.9
DCAR_002920 Daucus carota HOM05D008325 ORTHO05D010336 3.3e-06 55.5 97 38.1
MELO3C023628.2 Cucumis melo HOM05D023270 ORTHO05D010336 4.3e-06 55.1 104 38.5
RcHm_v2.0_Chr3g0486821 Rosa chinensis HOM05D008325 ORTHO05D010336 4.3e-06 55.1 142 34.5
Sc17g0000240 Simmondsia chinensis HOM05D008325 ORTHO05D010336 4.3e-06 55.1 118 39.0
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 7.3e-06 54.3 96 33.3
Nn4g25438 Nelumbo nucifera HOM05D008942 ORTHO05D009202 9.5e-06 53.9 122 35.2


User provided reference genes

Program Settings