Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 6.8e-72 273.9 136 100.0
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 1.6e-65 252.7 136 93.4
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 3.9e-51 204.9 121 81.8
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 6.6e-51 204.1 121 81.8
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.9e-50 202.6 119 82.4
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 9.6e-50 200.3 123 79.7
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 9.6e-50 200.3 120 80.8
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 1.6e-49 199.5 136 73.5
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 2.1e-49 199.1 119 79.8
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 2.8e-49 198.7 119 78.2
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 3.6e-49 198.4 119 79.0
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 4.8e-49 198.0 117 80.3
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 6.2e-49 197.6 123 78.0
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 6.2e-49 197.6 118 79.7
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 6.2e-49 197.6 122 79.5
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 6.2e-49 197.6 125 76.8
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 1.1e-48 196.8 120 78.3
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 1.8e-48 196.1 127 76.4
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.8e-48 196.1 125 76.8
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 2.4e-48 195.7 120 79.2
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 2.4e-48 195.7 120 77.5
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 2.4e-48 195.7 117 80.3
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 3.1e-48 195.3 113 83.2
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 4.0e-48 194.9 120 80.0
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 5.3e-48 194.5 117 79.5
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 6.9e-48 194.1 117 78.6
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 9.0e-48 193.7 122 77.9
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 2.0e-47 192.6 116 78.4
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 2.0e-47 192.6 122 76.2
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 4.5e-47 191.4 120 75.0
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 5.8e-47 191.0 119 76.5
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.3e-46 189.9 136 71.3
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 1.3e-46 189.9 125 73.6
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 1.7e-46 189.5 136 69.1
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 2.9e-46 188.7 119 77.3
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 6.4e-46 187.6 122 75.4
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 7.1e-45 184.1 127 70.9
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 9.3e-45 183.7 136 69.1
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 1.2e-44 183.3 123 73.2
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 1.6e-44 183.0 120 71.7
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 1.6e-44 183.0 120 70.0
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.7e-44 182.2 127 70.1
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 2.7e-44 182.2 111 79.3
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 3.5e-44 181.8 121 69.4
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.6e-44 181.4 154 63.0
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 7.9e-44 180.6 121 73.6
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 1.3e-43 179.9 136 67.6
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 1.8e-43 179.5 121 68.6
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 3.0e-43 178.7 121 72.7
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 3.0e-43 178.7 122 69.7
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 3.9e-43 178.3 120 69.2
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 8.7e-43 177.2 122 70.5
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.1e-42 176.8 127 69.3
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 1.9e-42 176.0 121 66.1
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 2.5e-42 175.6 117 68.4
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 2.5e-42 175.6 119 67.2
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 3.3e-42 175.3 117 68.4
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 3.3e-42 175.3 121 66.1
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 4.3e-42 174.9 119 69.7
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 4.3e-42 174.9 126 69.8
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 5.6e-42 174.5 124 68.5
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 1.3e-41 173.3 119 66.4
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 1.3e-41 173.3 119 66.4
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 1.3e-41 173.3 119 66.4
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 1.3e-41 173.3 119 66.4
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 1.1e-40 170.2 141 61.0
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.1e-40 170.2 120 68.3
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 2.4e-40 169.1 121 64.5
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.0e-40 168.3 101 80.2
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 1.2e-39 166.8 124 65.3
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 2.0e-39 166.0 124 66.9
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 3.4e-39 165.2 103 77.7
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 4.5e-39 164.9 126 60.3
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 2.2e-38 162.5 124 61.3
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 3.8e-38 161.8 120 65.8
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 4.9e-38 161.4 129 65.1
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 8.4e-38 160.6 102 74.5
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 3.2e-37 158.7 122 64.8
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 3.9e-35 151.8 120 61.7
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 8.7e-35 150.6 136 58.8
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 5.6e-34 147.9 116 62.1
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 9.0e-32 140.6 114 60.5
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.5e-29 132.5 80 80.0
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.7e-28 129.0 126 50.8
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 4.6e-28 128.3 79 75.9
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 8.7e-27 124.0 80 72.5
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 1.1e-24 117.1 112 50.9
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 4.5e-23 111.7 130 47.7
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 6.5e-22 107.8 93 61.3
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 3.9e-19 98.6 112 48.2
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 6.7e-19 97.8 59 74.6
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 2.2e-17 92.8 82 62.2
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.5e-13 79.3 85 50.6
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 2.7e-12 75.9 104 42.3
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 4.1e-08 62.0 99 42.4
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 3.4e-07 58.9 48 64.6


User provided reference genes

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