Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 4.3e-127 458.0 231 100.0
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 5.2e-88 328.2 233 77.3
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 1.3e-62 243.8 230 59.6
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 2.1e-60 236.5 225 59.1
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 7.8e-60 234.6 227 59.5
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 1.3e-59 233.8 237 58.2
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.7e-59 233.4 237 58.2
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 6.6e-59 231.5 231 57.6
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.9e-58 229.9 229 57.6
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 4.3e-58 228.8 229 57.6
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 5.6e-58 228.4 227 58.1
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 5.6e-58 228.4 233 57.1
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 9.5e-58 227.6 236 57.6
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 9.5e-58 227.6 228 59.2
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.8e-57 226.1 230 56.5
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 3.6e-57 225.7 227 57.3
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.7e-57 225.3 236 57.6
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 1.1e-56 224.2 231 56.3
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.8e-56 223.4 197 60.4
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 3.1e-56 222.6 227 56.8
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 3.1e-56 222.6 197 60.4
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 2.6e-55 219.5 227 57.7
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 2.6e-55 219.5 225 56.0
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 4.4e-55 218.8 233 56.2
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 4.4e-55 218.8 239 56.1
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 4.4e-55 218.8 229 55.5
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 1.7e-54 216.9 227 55.9
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 6.4e-54 214.9 229 58.5
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 6.4e-54 214.9 226 55.3
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 1.1e-53 214.2 190 60.5
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 1.1e-53 214.2 189 63.5
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 1.4e-53 213.8 194 60.3
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 3.2e-53 212.6 186 62.9
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 3.2e-53 212.6 190 60.0
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 3.2e-53 212.6 229 54.6
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 4.1e-53 212.2 235 54.9
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 4.1e-53 212.2 227 54.6
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 9.2e-53 211.1 205 57.6
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 2.7e-52 209.5 188 61.2
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.5e-52 209.1 261 50.6
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 6.0e-52 208.4 230 53.9
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 1.3e-51 207.2 192 60.4
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 1.3e-51 207.2 229 55.5
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.7e-51 206.8 261 50.2
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 1.7e-51 206.8 195 59.0
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 1.7e-51 206.8 217 56.2
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.3e-51 206.5 213 55.9
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.0e-51 206.1 238 52.1
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 3.9e-51 205.7 223 53.4
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 5.1e-51 205.3 195 58.5
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 5.1e-51 205.3 230 53.0
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 5.1e-51 205.3 226 54.0
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 5.1e-51 205.3 211 56.9
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 8.6e-51 204.5 231 52.4
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.1e-50 204.1 238 51.7
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 1.1e-50 204.1 189 59.8
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 4.3e-50 202.2 232 53.0
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 7.3e-50 201.4 181 62.4
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 9.5e-50 201.1 191 58.6
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.2e-49 200.7 173 63.6
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 1.2e-49 200.7 229 52.8
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.6e-49 200.3 137 71.5
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 2.1e-49 199.9 206 56.3
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 2.8e-49 199.5 228 54.8
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 4.7e-49 198.7 246 52.8
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 8.1e-49 198.0 234 51.7
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 8.1e-49 198.0 219 53.0
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 1.4e-48 197.2 225 51.1
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 1.8e-48 196.8 234 52.1
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.4e-48 196.4 226 52.7
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 3.1e-48 196.1 228 54.8
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 3.1e-48 196.1 208 57.2
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 4.0e-48 195.7 224 52.2
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.2e-47 194.1 225 50.7
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 1.2e-47 194.1 226 50.9
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 1.5e-47 193.7 185 58.9
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 2.6e-47 193.0 226 51.3
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 2.6e-47 193.0 226 51.3
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 3.4e-47 192.6 227 51.5
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 4.4e-47 192.2 213 52.6
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 1.1e-45 187.6 181 59.7
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 2.4e-45 186.4 159 61.0
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 9.2e-45 184.5 129 74.4
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.2e-44 184.1 161 61.5
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 2.1e-44 183.3 226 50.0
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.2e-41 174.1 161 55.3
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 3.1e-40 169.5 162 56.8
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 6.0e-36 155.2 219 47.0
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 7.8e-36 154.8 183 51.9
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 1.3e-35 154.1 148 60.8
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 3.0e-35 152.9 134 63.4
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 8.7e-35 151.4 272 40.8
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 1.1e-34 151.0 111 69.4
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 1.6e-33 147.1 152 52.6
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 8.1e-33 144.8 208 44.2
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 4.0e-32 142.5 129 62.0
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 6.9e-32 141.7 134 59.7
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.2e-31 141.0 138 58.7
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 2.6e-31 139.8 104 68.3
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.2e-28 131.0 132 55.3
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 3.5e-28 129.4 159 44.0
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 4.6e-28 129.0 133 54.1
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 2.8e-25 119.8 184 41.3
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 8.1e-25 118.2 100 64.0
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 1.8e-24 117.1 230 37.8
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.2e-23 114.4 135 50.4
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.4e-23 112.8 71 81.7
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.4e-23 112.8 71 81.7
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.5e-21 106.7 108 56.5
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 3.2e-21 106.3 112 53.6
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 9.3e-21 104.8 82 67.1
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.5e-20 102.8 144 49.3
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 5.8e-15 85.5 103 38.8
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 3.2e-13 79.7 94 50.0
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 1.1e-10 71.2 39 82.1
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 1.1e-10 71.2 39 82.1


User provided reference genes

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