Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 0.0e+00 1114.8 557 100.0
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 0.0e+00 1076.2 575 95.0
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 5.2e-235 817.8 533 80.3
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.5e-128 463.4 556 48.6
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 4.4e-101 372.9 539 43.6
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 4.0e-94 349.7 572 42.1
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 1.5e-88 331.3 562 40.0
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 6.2e-87 325.9 556 38.3
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 1.5e-85 321.2 558 40.5
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 3.1e-78 297.0 548 37.8
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.2e-77 295.0 528 39.0
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 3.4e-77 293.5 456 41.2
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 2.2e-76 290.8 570 36.1
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.9e-76 290.4 573 36.3
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 1.9e-75 287.7 541 38.6
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 3.2e-75 287.0 558 37.3
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 1.1e-72 278.5 561 36.4
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 7.4e-72 275.8 573 35.1
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 3.6e-71 273.5 566 36.4
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 1.8e-70 271.2 551 36.1
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 3.4e-69 266.9 358 46.9
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 8.4e-68 262.3 600 33.5
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 2.3e-65 254.2 426 39.9
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.5e-64 251.5 406 40.6
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.9e-60 237.3 417 37.4
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 2.5e-59 234.2 479 36.5
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 2.5e-59 234.2 560 33.6
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 7.1e-59 232.6 472 36.0
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 1.8e-57 228.0 269 47.6
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 7.4e-56 222.6 559 34.0
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 8.2e-55 219.2 573 34.0
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 2.4e-54 217.6 310 43.9
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 6.9e-54 216.1 562 32.9
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 3.4e-53 213.8 548 32.8
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 1.0e-52 212.2 560 31.4
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 2.2e-52 211.1 571 33.6
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 3.8e-52 210.3 561 33.2
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 6.5e-52 209.5 549 34.4
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 3.6e-50 203.8 521 34.5
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.0e-49 202.2 557 31.1
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 1.1e-48 198.7 461 32.5
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 1.6e-47 194.9 480 33.1
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 8.2e-47 192.6 320 44.1
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 3.1e-46 190.7 437 36.6
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 4.1e-46 190.3 445 34.4
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 4.1e-46 190.3 545 31.9
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 6.9e-46 189.5 455 34.9
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 1.2e-45 188.7 559 30.8
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 1.5e-45 188.3 575 31.0
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 2.5e-43 181.0 553 31.5
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 4.2e-43 180.3 567 29.5
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 7.2e-43 179.5 563 28.1
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 9.4e-43 179.1 565 32.0
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 2.3e-41 174.5 359 37.9
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 3.0e-41 174.1 555 27.9
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 3.9e-41 173.7 558 28.1
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 5.1e-41 173.3 582 31.8
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 7.4e-40 169.5 538 30.9
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 5.3e-38 163.3 525 30.3
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 2.6e-37 161.0 420 32.6
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 1.7e-36 158.3 564 28.4
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 2.2e-36 157.9 359 35.9
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 1.6e-34 151.8 543 27.3
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 2.1e-34 151.4 562 27.8
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 2.7e-34 151.0 538 28.6
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 6.1e-34 149.8 480 30.6
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 7.9e-34 149.4 237 41.4
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 1.8e-33 148.3 465 29.9
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 1.1e-32 145.6 405 29.1
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 2.2e-31 141.4 562 28.3
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 6.3e-31 139.8 387 31.8
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 8.2e-31 139.4 405 28.1
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 1.6e-29 135.2 411 28.5
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 2.6e-29 134.4 404 28.5
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 2.6e-29 134.4 381 31.5
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 1.7e-28 131.7 286 36.7
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 2.9e-28 131.0 571 26.4
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 1.5e-27 128.6 265 38.9
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 3.2e-27 127.5 234 33.8
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 2.1e-26 124.8 275 31.6
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 1.0e-25 122.5 497 28.4
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 1.4e-25 122.1 489 28.0
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 3.0e-25 120.9 447 25.7
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 7.5e-24 116.3 247 38.1
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 9.7e-24 115.9 429 29.1
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 3.1e-22 110.9 224 33.5
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 3.1e-22 110.9 232 34.5
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 5.9e-21 106.7 457 28.7
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 7.7e-21 106.3 255 34.1
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 1.3e-20 105.5 380 29.5
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 8.5e-20 102.8 191 36.1
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 4.2e-19 100.5 466 27.3
CiPaw.07G104400 Carya illinoinensis HOM05D007164 ORTHO05D008802 4.7e-18 97.1 189 39.2
Duzib138G1663 Durio zibethinus HOM05D007164 ORTHO05D008802 4.4e-16 90.5 185 34.1
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 9.8e-16 89.4 428 26.4
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 3.5e-13 80.9 223 30.5
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 4.5e-13 80.5 92 48.9
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 1.7e-12 78.6 94 41.5
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.5e-11 75.5 206 28.2
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 6.8e-09 66.6 231 26.0
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 2.0e-08 65.1 142 28.2
Glyma.20G061700 Glycine max HOM05D007164 ORTHO05D008802 6.3e-07 60.1 322 26.4
BcaB06g26239 Brassica carinata HOM05D007164 ORTHO05D008802 1.1e-06 59.3 94 42.6
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 2.4e-06 58.2 189 25.4


User provided reference genes

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