Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 1.1e-240 836.3 437 100.0
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 1.3e-220 769.6 437 92.9
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 5.3e-158 561.6 437 68.0
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 9.6e-152 540.8 433 66.7
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.3e-151 540.4 435 66.7
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 5.8e-149 531.6 436 65.8
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 2.5e-147 526.2 436 65.4
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 2.3e-145 519.6 434 63.8
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 3.0e-145 519.2 437 65.2
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 3.9e-145 518.8 436 63.3
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 1.9e-144 516.5 434 64.5
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 1.9e-144 516.5 434 64.5
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 4.3e-144 515.4 434 63.6
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 3.5e-138 495.7 433 62.6
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 1.0e-137 494.2 440 60.9
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 7.4e-136 488.0 436 60.3
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 1.6e-135 486.9 437 62.0
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 2.4e-134 483.0 428 61.0
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 3.1e-134 482.6 415 61.2
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 3.1e-134 482.6 421 61.0
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 6.9e-134 481.5 431 60.6
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 6.9e-134 481.5 412 61.7
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 1.2e-133 480.7 419 64.2
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 7.7e-133 478.0 412 61.2
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 2.9e-132 476.1 436 59.6
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 9.4e-131 471.1 427 59.3
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 1.2e-130 470.7 423 59.3
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 2.1e-130 469.9 435 59.1
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 3.6e-130 469.2 433 57.5
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 7.9e-130 468.0 434 59.4
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 7.9e-130 468.0 438 58.9
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 2.3e-129 466.5 427 56.9
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 6.7e-129 464.9 433 57.0
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 1.1e-128 464.2 438 56.6
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 1.5e-128 463.8 440 59.3
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 1.3e-127 460.7 409 60.1
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 2.2e-127 459.9 443 57.6
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 6.3e-127 458.4 433 56.4
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 8.2e-127 458.0 427 56.0
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 8.2e-127 458.0 420 58.1
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 1.1e-126 457.6 433 56.4
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 3.1e-126 456.1 433 56.1
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 4.1e-126 455.7 421 56.5
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 5.3e-126 455.3 439 59.7
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 6.9e-126 454.9 433 56.4
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 1.5e-125 453.8 435 55.6
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 2.0e-125 453.4 433 56.1
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 2.6e-125 453.0 433 55.0
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 2.9e-124 449.5 426 57.3
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 8.5e-124 448.0 433 55.7
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 7.2e-123 444.9 433 55.4
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 2.7e-122 443.0 405 58.3
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 6.7e-121 438.3 425 55.5
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.3e-120 436.0 431 53.1
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 4.4e-120 435.6 434 55.8
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 2.2e-119 433.3 409 57.0
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 2.8e-119 433.0 425 55.1
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 2.6e-117 426.4 438 53.2
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 1.3e-116 424.1 355 67.9
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 2.5e-115 419.9 435 53.6
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.5e-115 418.7 441 52.8
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 1.2e-114 417.5 433 54.0
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 6.1e-114 415.2 441 52.6
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 1.8e-113 413.7 430 52.3
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 2.0e-112 410.2 354 59.3
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 2.0e-112 410.2 403 55.8
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 2.8e-111 406.4 438 51.1
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.4e-110 403.3 441 50.1
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 4.1e-110 402.5 447 50.8
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.6e-109 400.6 441 50.3
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 5.9e-109 398.7 406 53.2
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 5.9e-109 398.7 469 49.3
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 1.7e-108 397.1 403 53.3
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 8.5e-108 394.8 424 53.5
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 3.2e-107 392.9 421 52.5
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 5.5e-107 392.1 422 50.9
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 1.6e-106 390.6 408 53.4
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 2.7e-106 389.8 352 62.8
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 3.0e-105 386.3 367 54.0
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 1.8e-102 377.1 300 63.3
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 1.3e-100 370.9 406 51.2
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 5.5e-99 365.5 407 49.4
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 5.2e-97 359.0 437 46.7
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 2.0e-96 357.1 415 50.1
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 3.7e-95 352.8 340 59.7
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 5.5e-91 339.0 451 44.8
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 7.5e-88 328.6 434 45.2
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 1.2e-85 321.2 373 48.0
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 1.0e-84 318.2 350 52.9
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 5.2e-81 305.8 441 42.9
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 1.2e-77 294.7 404 41.6
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 4.7e-74 282.7 297 54.9
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 3.4e-72 276.6 436 36.9
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 6.4e-71 272.3 395 42.0
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 2.3e-68 263.8 366 43.7
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 9.9e-64 248.4 385 36.6
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 9.6e-59 231.9 207 55.1
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 8.1e-58 228.8 237 53.2
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 5.2e-57 226.1 423 34.5
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 3.0e-52 210.3 194 52.6
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 2.3e-44 184.1 210 54.3
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 9.3e-30 135.6 85 71.8
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 1.6e-29 134.8 194 39.2
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.1e-19 102.1 121 46.3
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.9e-19 101.3 65 61.5
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.6e-18 98.2 65 63.1
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.3e-18 96.3 57 64.9
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 1.0e-12 79.0 268 28.0
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 8.2e-10 69.3 98 50.0
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 6.9e-09 66.2 75 57.3
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.3e-07 62.0 34 73.5
ECA233G4477 Erigeron canadensis HOM05D001726 ORTHO05D001761 1.1e-06 58.9 159 28.3
SEGI_05800 Sequoiadendron giganteum HOM05D001726 ORTHO05D001761 1.1e-06 58.9 173 28.9
Phvul.004G173400 Phaseolus vulgaris HOM05D001726 ORTHO05D001761 1.9e-06 58.2 186 29.0
RcHm_v2.0_Chr7g0204891 Rosa chinensis HOM05D001726 ORTHO05D001761 2.5e-06 57.8 159 28.9
AUR62022252 Chenopodium quinoa HOM05D001726 ORTHO05D001761 5.5e-06 56.6 160 28.1
AUR62031967 Chenopodium quinoa HOM05D001726 ORTHO05D001761 5.5e-06 56.6 160 28.1
FvH4_4g20950 Fragaria vesca HOM05D001726 ORTHO05D001761 5.5e-06 56.6 149 34.9
FAN12G4278 Fragaria x ananassa HOM05D001726 ORTHO05D001761 5.5e-06 56.6 149 34.9
Gohir.D08G265200 Gossypium hirsutum HOM05D001726 ORTHO05D001761 5.5e-06 56.6 160 28.8
Gorai.004G283100 Gossypium raimondii HOM05D001726 ORTHO05D001761 5.5e-06 56.6 160 28.8
Gohir.A08G244300 Gossypium hirsutum HOM05D001726 ORTHO05D001761 7.2e-06 56.2 160 28.8


User provided reference genes

Program Settings