Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 2.9e-90 335.1 159 100.0
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 2.4e-36 156.0 102 72.5
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 8.1e-32 141.0 76 86.8
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.4e-28 130.2 76 80.3
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 5.1e-26 121.7 83 68.7
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 8.6e-26 120.9 83 67.5
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 9.6e-25 117.5 68 75.0
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 2.1e-24 116.3 104 54.8
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 3.6e-24 115.5 70 74.3
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 4.7e-24 115.2 71 69.0
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 6.2e-24 114.8 70 74.3
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 6.2e-24 114.8 105 55.2
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 6.2e-24 114.8 70 74.3
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 8.1e-24 114.4 70 74.3
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.1e-23 114.0 74 67.6
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 2.4e-23 112.8 70 77.1
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 2.4e-23 112.8 105 55.2
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 2.4e-23 112.8 105 55.2
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 2.4e-23 112.8 70 70.0
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 3.1e-23 112.5 104 52.9
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 3.1e-23 112.5 110 50.9
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 3.1e-23 112.5 70 70.0
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 3.1e-23 112.5 70 72.9
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 3.1e-23 112.5 104 51.0
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 6.8e-23 111.3 104 52.9
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 8.9e-23 110.9 70 71.4
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 8.9e-23 110.9 122 45.9
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 1.2e-22 110.5 70 71.4
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.2e-22 110.5 70 72.9
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.2e-22 110.5 70 72.9
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.2e-22 110.5 70 72.9
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.2e-22 110.5 70 72.9
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 1.2e-22 110.5 75 68.0
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.5e-22 110.2 104 51.0
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 2.0e-22 109.8 104 51.0
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 2.0e-22 109.8 70 68.6
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 4.4e-22 108.6 70 71.4
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 5.8e-22 108.2 70 71.4
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 5.8e-22 108.2 70 70.0
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 7.6e-22 107.8 104 51.0
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 7.6e-22 107.8 70 71.4
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 7.6e-22 107.8 108 48.1
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 9.9e-22 107.5 104 51.0
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 9.9e-22 107.5 104 51.0
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 1.3e-21 107.1 70 67.1
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 1.3e-21 107.1 70 68.6
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.3e-21 107.1 98 53.1
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.3e-21 107.1 98 53.1
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 1.3e-21 107.1 69 69.6
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 1.3e-21 107.1 104 50.0
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.3e-21 107.1 71 64.8
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 1.7e-21 106.7 106 52.8
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 4.9e-21 105.1 70 60.0
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 4.9e-21 105.1 70 64.3
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 4.9e-21 105.1 70 67.1
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 6.4e-21 104.8 104 48.1
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 6.4e-21 104.8 76 61.8
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 8.4e-21 104.4 105 49.5
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 8.4e-21 104.4 69 66.7
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 8.4e-21 104.4 70 70.0
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 1.1e-20 104.0 83 59.0
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 1.4e-20 103.6 98 50.0
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 2.4e-20 102.8 105 47.6
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 3.2e-20 102.4 71 64.8
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 4.2e-20 102.1 72 70.8
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 9.3e-20 100.9 70 64.3
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 1.2e-19 100.5 71 66.2
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 1.2e-19 100.5 71 64.8
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 1.2e-19 100.5 70 60.0
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 1.6e-19 100.1 70 64.3
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 1.6e-19 100.1 70 64.3
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 2.1e-19 99.8 71 62.0
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 3.5e-19 99.0 71 62.0
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 3.5e-19 99.0 71 62.0
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 3.5e-19 99.0 105 47.6
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 3.5e-19 99.0 71 62.0
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 6.0e-19 98.2 70 65.7
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 1.0e-18 97.4 70 64.3
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 1.3e-18 97.1 109 45.9
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 1.7e-18 96.7 71 62.0
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 2.3e-18 96.3 105 44.8
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 2.3e-18 96.3 105 44.8
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.3e-18 96.3 62 72.6
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 2.3e-18 96.3 71 60.6
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 3.0e-18 95.9 102 47.1
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 3.9e-18 95.5 105 44.8
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 3.9e-18 95.5 71 60.6
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 5.1e-18 95.1 70 62.9
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 5.1e-18 95.1 68 64.7
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 5.1e-18 95.1 70 62.9
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 5.1e-18 95.1 68 61.8
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 6.6e-18 94.7 71 60.6
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 8.7e-18 94.4 71 62.0
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 1.1e-17 94.0 70 61.4
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 1.1e-17 94.0 64 71.9
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.5e-17 93.6 59 67.8
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 1.5e-17 93.6 72 58.3
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 1.9e-17 93.2 68 61.8
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 2.5e-17 92.8 68 63.2
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 2.1e-16 89.7 106 42.5
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 2.8e-16 89.4 126 39.7
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 1.8e-15 86.7 71 59.2
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 9.0e-15 84.3 57 68.4
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 2.0e-14 83.2 102 42.2
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 7.6e-14 81.3 59 62.7
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 2.9e-13 79.3 69 52.2
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 3.8e-13 79.0 68 54.4
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 5.4e-12 75.1 67 52.2
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 1.2e-11 73.9 68 50.0
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 2.7e-11 72.8 53 58.5
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 2.7e-11 72.8 62 53.2
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 1.5e-09 67.0 68 42.6
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 1.4e-07 60.5 108 30.6
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 9.0e-07 57.8 107 32.7


User provided reference genes

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