Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 6.2e-60 233.8 108 100.0
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 5.9e-34 147.5 98 71.4
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 3.2e-24 115.2 98 59.2
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 8.2e-20 100.5 90 50.0
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 5.3e-19 97.8 81 56.8
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 5.3e-19 97.8 93 50.5
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 5.3e-19 97.8 93 50.5
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 2.0e-18 95.9 61 67.2
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 2.6e-18 95.5 93 49.5
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.3e-17 93.2 96 49.0
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 1.7e-17 92.8 79 57.0
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 2.2e-17 92.4 96 49.0
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.2e-17 92.4 96 49.0
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.2e-17 92.4 96 49.0
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 2.9e-17 92.0 71 62.0
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 2.9e-17 92.0 71 62.0
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 6.5e-17 90.9 84 53.6
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 6.5e-17 90.9 96 47.9
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 6.5e-17 90.9 81 50.6
COL.COLO4_06217 Corchorus olitorius HOM05D007943 ORTHO05D010047 8.5e-17 90.5 94 45.7
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 8.5e-17 90.5 90 46.7
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.1e-16 90.1 96 47.9
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.1e-16 90.1 78 57.7
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 2.5e-16 89.0 89 49.4
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 5.5e-16 87.8 56 62.5
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 7.2e-16 87.4 85 50.6
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 1.6e-15 86.3 94 42.6
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 2.1e-15 85.9 98 48.0
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 2.7e-15 85.5 86 47.7
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 3.6e-15 85.1 76 52.6
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 8.0e-15 84.0 100 44.0
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 1.8e-14 82.8 68 50.0
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 2.3e-14 82.4 49 71.4
Lalb_Chr02g0157681 Lupinus albus HOM05D007943 ORTHO05D010047 5.2e-14 81.3 98 45.9
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 1.5e-13 79.7 93 45.2
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 5.7e-13 77.8 88 47.7
Hund16743 Selenicereus undatus HOM05D007943 ORTHO05D010047 7.4e-13 77.4 70 45.7
Aqoxy7G00012 Aquilegia oxysepala HOM05D007943 ORTHO05D010047 9.7e-13 77.0 67 49.3
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 9.7e-13 77.0 75 49.3
CSS0001750 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 2.2e-12 75.9 57 56.1
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 2.2e-12 75.9 85 43.5
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 2.8e-12 75.5 56 57.1
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 3.7e-12 75.1 79 50.6
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 6.3e-12 74.3 54 59.3
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 1.1e-11 73.6 48 64.6
Glyma.19G259000 Glycine max HOM05D007943 ORTHO05D010047 1.4e-11 73.2 68 47.1
arahy.Tifrunner.gnm1.ann1.FJCJ23 Arachis hypogaea HOM05D007943 ORTHO05D010047 9.1e-11 70.5 59 47.5
Zm00001eb073340 Zea mays HOM05D007943 ORTHO05D010047 3.5e-10 68.6 51 51.0
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 4.5e-10 68.2 50 60.0
Sc23g0001870 Simmondsia chinensis HOM05D007943 ORTHO05D010047 4.5e-10 68.2 52 55.8
Nn3g18838 Nelumbo nucifera HOM05D007943 ORTHO05D010047 5.9e-10 67.8 77 41.6
Glyma.03G260100 Glycine max HOM05D007943 ORTHO05D010047 1.0e-09 67.0 62 45.2
AUR62004549 Chenopodium quinoa HOM05D007943 ORTHO05D010047 1.3e-09 66.6 84 38.1
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 1.7e-09 66.2 97 37.1
Carub.0001s0107 Capsella rubella HOM05D007943 ORTHO05D010047 3.8e-09 65.1 68 42.6
Os03g0126900 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 5.0e-09 64.7 47 53.2
AL1G11360 Arabidopsis lyrata HOM05D007943 ORTHO05D010047 6.5e-09 64.3 83 37.3
Sed0006019 Sechium edule HOM05D007943 ORTHO05D010047 8.5e-09 63.9 90 38.9
Lj3g0013373 Lotus japonicus HOM05D007943 ORTHO05D010047 1.1e-08 63.5 66 43.9
Rhsim01G0178600 Rhododendron simsii HOM05D007943 ORTHO05D010047 2.5e-08 62.4 91 41.8
DCAR_006654 Daucus carota HOM05D007943 ORTHO05D010047 3.2e-08 62.0 45 53.3
Os04g0577375 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 4.2e-08 61.6 53 45.3
BolC8t52866H Brassica oleracea HOM05D007943 ORTHO05D010047 5.5e-08 61.2 97 32.0
A09p68930 Brassica napus HOM05D007943 ORTHO05D010047 7.2e-08 60.8 89 34.8
CsaV3_3G007690 Cucumis sativus L. HOM05D007943 ORTHO05D010047 9.4e-08 60.5 52 42.3
TAR375G0647 Trochodendron aralioides HOM05D007943 ORTHO05D010047 9.4e-08 60.5 50 54.0
MELO3C005988.2 Cucumis melo HOM05D007943 ORTHO05D010047 2.7e-07 58.9 98 31.6
Os03g0315200 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 2.7e-07 58.9 53 43.4
Os08g0113900 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 1.0e-06 57.0 45 51.1
FAN06G4370 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.4e-06 56.6 57 49.1
Solyc10g009260.1 Solanum lycopersicum HOM05D007943 ORTHO05D010047 4.0e-06 55.1 42 52.4
Zm00001eb001970 Zea mays HOM05D007943 ORTHO05D010047 8.8e-06 53.9 41 51.2


User provided reference genes

Program Settings