Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 0.0e+00 1248.8 639 100.0
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 0.0e+00 1146.3 640 93.4
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 5.3e-308 1060.4 635 86.8
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 4.3e-294 1014.2 619 86.1
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.4e-263 912.9 633 77.3
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 6.8e-247 857.4 644 70.2
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.3e-242 843.2 647 69.6
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.3e-234 816.6 638 65.5
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 3.0e-234 815.5 602 70.6
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 3.3e-233 812.0 655 68.1
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 5.2e-231 804.7 582 71.6
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 6.8e-231 804.3 638 68.8
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.0e-230 802.7 638 67.1
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.5e-225 785.8 640 67.8
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.3e-225 785.4 640 68.1
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.2e-224 783.5 640 68.1
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 6.4e-221 771.2 639 65.4
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 3.0e-218 762.3 640 64.7
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 5.1e-218 761.5 640 64.7
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.5e-214 750.0 637 64.4
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 3.4e-214 748.8 641 62.6
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 6.4e-213 744.6 686 59.0
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.6e-211 740.0 622 64.3
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 2.1e-211 739.6 641 62.9
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 7.8e-211 737.6 643 63.6
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.7e-210 736.5 632 64.4
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 3.9e-210 735.3 644 62.0
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.1e-209 733.8 636 64.8
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 9.6e-209 730.7 640 62.2
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 2.8e-208 729.2 647 61.2
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 6.9e-207 724.5 677 60.3
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 6.9e-207 724.5 648 62.5
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.5e-206 723.4 677 60.1
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.9e-205 719.2 640 62.5
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 8.4e-205 717.6 642 62.9
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 2.1e-203 713.0 642 63.2
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 2.7e-203 712.6 660 57.3
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 2.7e-203 712.6 647 62.9
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 6.0e-203 711.4 581 64.4
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 3.0e-202 709.1 639 61.8
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 1.9e-201 706.4 637 60.9
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 4.3e-201 705.3 638 58.5
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 1.6e-200 703.4 640 61.6
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 2.8e-200 702.6 642 57.8
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 1.1e-199 700.7 636 61.9
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 3.1e-199 699.1 606 59.7
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.5e-198 696.8 644 59.9
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 4.9e-197 691.8 624 63.6
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.1e-196 690.6 635 58.0
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.9e-196 689.9 643 61.9
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 1.2e-195 687.2 647 59.4
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 4.6e-195 685.3 630 61.9
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 4.6e-195 685.3 630 61.9
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 4.6e-195 685.3 662 58.6
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 6.0e-195 684.9 656 58.1
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 8.7e-194 681.0 630 59.2
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 8.7e-194 681.0 645 58.0
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-193 680.6 639 58.4
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 4.3e-193 678.7 642 61.4
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.6e-192 676.8 639 59.3
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 2.8e-192 676.0 639 59.2
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 1.8e-191 673.3 641 56.6
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 3.1e-191 672.5 635 57.8
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 4.0e-191 672.2 636 59.7
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 4.0e-191 672.2 647 57.7
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 2.6e-190 669.5 652 56.7
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.0e-189 667.5 641 57.4
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.3e-189 667.2 623 58.1
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 1.3e-189 667.2 639 56.7
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.7e-189 666.8 640 57.3
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 2.2e-189 666.4 644 55.9
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.8e-189 665.6 639 58.1
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 1.9e-188 663.3 648 58.2
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 3.2e-188 662.5 638 58.9
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.1e-188 661.4 637 58.7
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.1e-188 661.4 637 58.7
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 9.3e-188 661.0 659 55.4
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.2e-187 660.6 643 57.1
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 1.6e-187 660.2 438 72.8
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.1e-187 659.8 642 58.3
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 3.5e-187 659.1 634 57.3
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 6.0e-187 658.3 637 58.1
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 7.9e-187 657.9 626 56.1
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 1.0e-186 657.5 644 58.4
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 3.0e-186 656.0 648 56.8
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 1.9e-185 653.3 644 56.4
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 9.0e-183 644.4 617 56.1
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 2.7e-179 632.9 545 63.3
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.1e-175 619.4 461 64.9
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.2e-174 617.5 644 54.3
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 1.5e-174 617.1 645 55.7
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 7.7e-174 614.8 634 52.7
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 2.9e-173 612.8 629 55.6
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 2.3e-170 603.2 635 52.8
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 9.1e-167 591.3 631 53.9
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 2.0e-166 590.1 637 52.6
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 5.9e-166 588.6 637 52.3
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 2.4e-151 540.0 394 66.8
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 4.7e-147 525.8 643 51.6
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 4.0e-146 522.7 354 70.9
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.8e-135 487.3 351 67.5
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 3.5e-134 483.0 527 50.3
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 1.2e-121 441.4 463 49.5
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 8.6e-117 425.2 648 40.6
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 1.7e-112 411.0 420 48.6
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.2e-110 404.8 592 41.0
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 5.8e-105 386.0 484 42.4
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.9e-79 301.2 562 35.4
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 9.6e-76 288.9 609 31.5
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.3e-56 225.3 511 30.9
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 4.4e-52 210.3 583 27.4
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 7.7e-49 199.5 422 32.7
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 4.4e-28 130.6 100 62.0
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 4.4e-28 130.6 100 62.0
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.8e-26 125.2 104 58.7
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.0e-16 92.8 296 24.3


User provided reference genes

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