Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 9.0e-93 343.6 175 100.0
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.6e-49 199.9 130 81.5
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 6.1e-41 171.4 116 81.0
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 2.0e-39 166.4 109 79.8
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.6e-36 156.8 125 68.8
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 2.3e-35 152.9 110 71.8
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 5.6e-34 148.3 125 68.0
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 7.3e-34 147.9 109 71.6
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 1.2e-33 147.1 109 71.6
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.6e-33 146.7 126 63.5
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.6e-33 145.6 109 70.6
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.6e-33 145.6 109 70.6
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 8.0e-33 144.4 129 62.8
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 2.3e-32 142.9 128 62.5
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 3.1e-32 142.5 127 61.4
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.1e-32 142.5 108 68.5
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 4.0e-32 142.1 134 58.2
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 4.0e-32 142.1 109 65.1
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 5.2e-32 141.7 108 67.6
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 8.9e-32 141.0 134 58.2
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.2e-31 140.6 137 59.9
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 1.5e-31 140.2 128 60.2
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 4.4e-31 138.7 109 67.9
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 5.8e-31 138.3 128 59.4
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 5.8e-31 138.3 128 60.2
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 7.5e-31 137.9 109 67.0
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.8e-31 137.5 109 66.1
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 2.9e-30 136.0 129 60.5
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 2.9e-30 136.0 132 57.6
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 3.7e-30 135.6 128 57.8
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 3.7e-30 135.6 128 57.8
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 3.7e-30 135.6 109 66.1
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 4.9e-30 135.2 100 69.0
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 4.9e-30 135.2 100 69.0
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 4.9e-30 135.2 107 61.7
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.1e-29 134.0 96 67.7
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.9e-29 133.3 129 59.7
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 2.4e-29 132.9 128 60.9
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 3.2e-29 132.5 110 66.4
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 5.4e-29 131.7 132 60.6
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 9.2e-29 131.0 109 64.2
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 9.2e-29 131.0 128 57.0
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 1.2e-28 130.6 128 58.6
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 2.7e-28 129.4 129 58.9
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.7e-28 129.4 135 55.6
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 3.5e-28 129.0 107 61.7
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 7.8e-28 127.9 128 56.2
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.0e-27 127.5 137 56.9
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 1.0e-27 127.5 109 63.3
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 1.7e-27 126.7 113 59.3
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.7e-27 126.7 107 63.6
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.7e-27 126.7 128 57.8
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 2.3e-27 126.3 135 53.3
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 3.0e-27 125.9 128 58.6
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 3.0e-27 125.9 128 58.6
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 3.0e-27 125.9 128 58.6
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 3.0e-27 125.9 110 60.0
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.9e-27 125.6 109 58.7
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 6.6e-27 124.8 127 59.1
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 6.6e-27 124.8 127 59.1
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 6.6e-27 124.8 104 63.5
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 8.6e-27 124.4 107 61.7
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.1e-26 124.0 139 54.7
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.1e-26 124.0 108 63.0
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.5e-26 122.9 107 59.8
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 5.6e-26 121.7 93 67.7
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 5.6e-26 121.7 132 55.3
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 7.3e-26 121.3 110 58.2
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 7.3e-26 121.3 108 59.3
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 7.3e-26 121.3 108 59.3
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 7.3e-26 121.3 109 61.5
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 9.5e-26 120.9 109 62.4
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.2e-25 120.6 109 62.4
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.2e-25 120.6 102 59.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 1.6e-25 120.2 132 55.3
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.6e-25 120.2 112 55.4
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.6e-25 120.2 109 62.4
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.6e-25 120.2 110 58.2
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 2.1e-25 119.8 128 55.5
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.8e-25 119.4 109 61.5
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 6.2e-25 118.2 128 50.8
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 8.1e-25 117.9 108 57.4
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.1e-24 117.5 94 64.9
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.1e-24 117.5 104 61.5
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.1e-24 117.5 83 72.3
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 1.4e-24 117.1 109 57.8
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 4.0e-24 115.5 107 56.1
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 5.2e-24 115.2 112 54.5
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 8.9e-24 114.4 134 53.0
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 2.0e-23 113.2 109 55.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 4.4e-23 112.1 120 50.8
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 5.8e-23 111.7 83 68.7
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 7.5e-23 111.3 125 52.8
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 9.8e-23 110.9 98 62.2
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.2e-22 109.8 125 52.8
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 2.2e-22 109.8 143 48.3
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 4.9e-22 108.6 107 56.1
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 4.9e-22 108.6 108 54.6
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 6.4e-22 108.2 134 48.5
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.4e-21 107.1 106 52.8
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 1.9e-21 106.7 77 68.8
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 3.2e-21 105.9 106 53.8
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 3.2e-21 105.9 107 52.3
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 4.1e-21 105.5 125 50.4
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 5.4e-21 105.1 112 50.0
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 1.2e-20 104.0 130 43.1
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.6e-20 102.1 106 49.1
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.0e-19 100.9 127 46.5
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 2.3e-19 99.8 128 45.3
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 5.1e-19 98.6 127 44.9
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 6.6e-19 98.2 84 54.8
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 4.3e-18 95.5 105 52.4
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 2.1e-17 93.2 84 57.1
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.8e-16 90.1 183 37.7
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 2.3e-16 89.7 110 50.0
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 4.4e-15 85.5 84 47.6
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.3e-14 84.0 60 71.7
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 2.2e-14 83.2 80 50.0
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.1e-13 80.9 80 52.5
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.4e-13 80.5 60 73.3
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.9e-13 80.1 89 55.1
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 1.6e-12 77.0 94 52.1
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.8e-08 63.5 116 35.3
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 8.9e-08 61.2 80 41.2
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 2.9e-06 56.2 127 29.1


User provided reference genes

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