Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 3.4e-89 331.6 167 100.0
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.3e-80 303.1 166 92.8
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 1.1e-68 263.5 175 83.4
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.6e-62 243.0 173 79.8
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 1.3e-48 196.8 173 64.2
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 2.5e-47 192.6 176 64.2
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 2.1e-46 189.5 176 63.6
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 1.1e-44 183.7 164 67.1
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 1.9e-44 183.0 169 64.5
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 1.9e-44 183.0 161 65.2
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 5.7e-44 181.4 184 60.9
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 9.7e-44 180.6 169 63.9
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 1.3e-43 180.3 166 64.5
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 2.8e-43 179.1 182 62.6
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.7e-43 178.7 161 65.2
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.7e-43 178.7 161 65.2
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.8e-43 178.3 161 64.6
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 4.8e-43 178.3 166 63.3
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 6.3e-43 177.9 175 61.7
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 1.1e-42 177.2 171 60.8
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 2.4e-42 176.0 174 63.8
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 4.1e-42 175.3 175 61.1
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.1e-42 175.3 163 64.4
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.5e-41 173.3 174 63.2
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 2.6e-41 172.6 168 61.9
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 3.4e-41 172.2 166 60.8
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.1e-39 167.2 163 62.6
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 1.1e-39 167.2 190 55.8
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 3.6e-38 162.2 169 59.2
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 1.4e-37 160.2 188 53.7
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 5.1e-37 158.3 164 58.5
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 8.8e-37 157.5 161 58.4
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.1e-36 157.1 163 56.4
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 1.9e-36 156.4 166 57.8
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 4.3e-36 155.2 173 56.6
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 1.7e-35 153.3 175 54.9
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 4.8e-35 151.8 173 58.4
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.4e-34 150.2 164 53.7
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 2.4e-34 149.4 177 54.8
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.4e-34 149.4 164 53.0
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 4.1e-34 148.7 151 58.9
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 2.0e-33 146.4 168 55.4
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 2.9e-32 142.5 170 51.2
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 5.0e-32 141.7 174 55.7
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 6.5e-32 141.4 164 56.7
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 1.1e-31 140.6 168 52.4
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 4.2e-31 138.7 166 52.4
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 1.6e-30 136.7 162 49.4
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 2.1e-30 136.3 169 52.1
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 2.1e-30 136.3 144 59.7
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 7.9e-30 134.4 163 52.8
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.0e-29 134.0 157 56.1
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.3e-29 132.9 180 47.2
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 2.3e-29 132.9 169 51.5
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 3.3e-28 129.0 171 46.2
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 6.3e-27 124.8 168 48.2
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 1.4e-26 123.6 185 46.5
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 1.8e-26 123.2 186 46.2
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.4e-26 122.9 156 46.8
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 4.1e-26 122.1 185 47.6
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 4.1e-26 122.1 163 46.6
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 6.9e-26 121.3 169 47.9
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 9.1e-26 120.9 164 48.2
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 1.2e-25 120.6 167 46.1
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 2.0e-25 119.8 171 46.8
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 3.4e-25 119.0 166 49.4
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 1.1e-23 114.0 159 46.5
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 1.9e-23 113.2 149 50.3
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 2.5e-23 112.8 168 46.4
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 3.2e-23 112.5 159 45.9
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 2.1e-22 109.8 160 50.0
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 3.6e-22 109.0 168 46.4
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 8.0e-22 107.8 164 47.0
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 1.0e-21 107.5 161 45.3
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 1.4e-21 107.1 165 46.7
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 1.4e-21 107.1 165 46.7
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 5.2e-21 105.1 169 43.8
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 5.2e-21 105.1 162 46.3
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 8.8e-21 104.4 167 46.1
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 4.8e-19 98.6 159 44.7
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 6.3e-19 98.2 163 46.6
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.1e-18 97.4 163 46.6
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 4.1e-18 95.5 120 49.2
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 4.5e-17 92.0 165 40.0
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 2.2e-16 89.7 162 43.2
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 8.5e-16 87.8 166 41.0
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 1.1e-15 87.4 173 40.5
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 1.1e-15 87.4 159 40.3
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 3.2e-15 85.9 164 36.6
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 5.2e-13 78.6 68 60.3
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 8.8e-13 77.8 170 40.6
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 1.7e-11 73.6 141 43.3
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 2.2e-11 73.2 121 43.8
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 4.1e-10 68.9 97 48.5
FAN10G0406 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.2e-07 59.3 81 53.1


User provided reference genes

Program Settings