Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0118400 Salix brachista HOM05D003683 ORTHO05D004143 2.1e-50 202.2 114 100.0
Potri.002G149600 Populus trichocarpa HOM05D003683 ORTHO05D004143 2.3e-36 155.6 113 76.1
Potri.014G071200 Populus trichocarpa HOM05D003683 ORTHO05D004143 4.6e-29 131.3 114 64.9
Cfa001703 Carpinus fangiana HOM05D003683 ORTHO05D004143 8.1e-18 94.0 102 52.9
Dinv43725 Davidia involucrata HOM05D003683 ORTHO05D004143 3.4e-16 88.6 109 48.6
Dinv32390 Davidia involucrata HOM05D003683 ORTHO05D004143 2.2e-15 85.9 106 49.1
Duzib133G0707 Durio zibethinus HOM05D003683 ORTHO05D004143 7.1e-14 80.9 91 52.7
RcHm_v2.0_Chr1g0350821 Rosa chinensis HOM05D003683 ORTHO05D004143 7.1e-14 80.9 98 50.0
CiPaw.01G260700 Carya illinoinensis HOM05D003683 ORTHO05D004143 9.3e-14 80.5 92 55.4
Prupe.2G147300 Prunus persica HOM05D003683 ORTHO05D004143 6.0e-13 77.8 99 46.5
Hma1.2p1_3528F.1_g336600 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 6.7e-12 74.3 103 46.6
Manes.01G264900 Manihot esculenta HOM05D003683 ORTHO05D004143 8.7e-12 73.9 110 46.4
FAN01G1734 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.1e-11 73.6 95 47.4
FvH4_7g12070 Fragaria vesca HOM05D003683 ORTHO05D004143 1.5e-11 73.2 89 50.6
FAN06G0493 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.5e-11 73.2 89 50.6
FAN06G2934 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.5e-11 73.2 89 50.6
VMungo1383G1500 Vigna mungo HOM05D003683 ORTHO05D004143 1.5e-11 73.2 101 49.5
Phvul.008G075300 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 1.9e-11 72.8 101 49.5
COL.COLO4_12571 Corchorus olitorius HOM05D003683 ORTHO05D004143 2.5e-11 72.4 102 47.1
CiPaw.02G166400 Carya illinoinensis HOM05D003683 ORTHO05D004143 5.6e-11 71.2 90 48.9
FAN10G4272 Fragaria x ananassa HOM05D003683 ORTHO05D004143 7.4e-11 70.9 89 49.4
Thecc.01G374500 Theobroma cacao HOM05D003683 ORTHO05D004143 7.4e-11 70.9 87 48.3
Hma1.2p1_1793F.1_g302590 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.1e-09 67.0 101 44.6
MD02G1201500 Malus domestica HOM05D003683 ORTHO05D004143 1.1e-09 67.0 101 43.6
FAN10G1839 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.4e-09 66.6 84 50.0
Lj3g0025203 Lotus japonicus HOM05D003683 ORTHO05D004143 1.4e-09 66.6 98 43.9
Cfa012041 Carpinus fangiana HOM05D003683 ORTHO05D004143 5.3e-09 64.7 103 42.7
Glyma.09G268100 Glycine max HOM05D003683 ORTHO05D004143 2.6e-08 62.4 99 45.5
Haze_09035 Corylus avellana HOM05D003683 ORTHO05D004143 5.8e-08 61.2 103 43.7
Phvul.010G085600 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 5.8e-08 61.2 100 41.0
Aqoxy7G00590 Aquilegia oxysepala HOM05D003683 ORTHO05D004143 7.6e-08 60.8 98 43.9
Duzib138G1197 Durio zibethinus HOM05D003683 ORTHO05D004143 7.6e-08 60.8 101 41.6
Lj2A204T52 Lonicera japonica HOM05D003683 ORTHO05D004143 7.6e-08 60.8 94 45.7
MD07G1124000 Malus domestica HOM05D003683 ORTHO05D004143 7.6e-08 60.8 99 42.4
Gohir.D11G086200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 9.9e-08 60.5 88 48.9
Nn4g26435 Nelumbo nucifera HOM05D003683 ORTHO05D004143 9.9e-08 60.5 94 45.7
Sed0003331 Sechium edule HOM05D003683 ORTHO05D004143 9.9e-08 60.5 100 44.0
Gohir.A11G081600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.7e-07 59.7 88 46.6
Lalb_Chr03g0039121 Lupinus albus HOM05D003683 ORTHO05D004143 2.9e-07 58.9 101 37.6
Glyma.18G221800 Glycine max HOM05D003683 ORTHO05D004143 3.8e-07 58.5 93 41.9
Sopen08g028050 Solanum pennellii HOM05D003683 ORTHO05D004143 3.8e-07 58.5 88 44.3
Dinv39058 Davidia involucrata HOM05D003683 ORTHO05D004143 4.9e-07 58.2 82 47.6
Lsat_1_v5_gn_4_37980 Lactuca sativa HOM05D003683 ORTHO05D004143 4.9e-07 58.2 105 38.1
Solyc08g079690.4 Solanum lycopersicum HOM05D003683 ORTHO05D004143 6.4e-07 57.8 88 44.3
Oeu064712.1 Olea europaea HOM05D003683 ORTHO05D004143 8.4e-07 57.4 82 48.8
Peaxi162Scf00021g00139 Petunia axillaris HOM05D003683 ORTHO05D004143 8.4e-07 57.4 102 39.2
Gorai.007G092100 Gossypium raimondii HOM05D003683 ORTHO05D004143 1.1e-06 57.0 88 56.8
CSS0021060 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 1.4e-06 56.6 92 42.4
CAN.G630.45 Capsicum annuum HOM05D003683 ORTHO05D004143 1.9e-06 56.2 90 43.3
Glyma.03G022200 Glycine max HOM05D003683 ORTHO05D004143 1.9e-06 56.2 81 40.7
TAR629G0669 Trochodendron aralioides HOM05D003683 ORTHO05D004143 2.4e-06 55.8 79 48.1
TAR629G3017 Trochodendron aralioides HOM05D003683 ORTHO05D004143 2.4e-06 55.8 79 48.1
ClCG05G002130 Citrullus lanatus HOM05D003683 ORTHO05D004143 3.2e-06 55.5 78 46.2
PGSC0003DMG400003921 Solanum tuberosum HOM05D003683 ORTHO05D004143 3.2e-06 55.5 90 42.2
GSVIVG01027629001 Vitis vinifera HOM05D003683 ORTHO05D004143 3.2e-06 55.5 86 45.3
Dinv37740 Davidia involucrata HOM05D003683 ORTHO05D004143 5.5e-06 54.7 91 41.8
Oeu056803.1 Olea europaea HOM05D003683 ORTHO05D004143 5.5e-06 54.7 96 43.8
Gohir.A03G010200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 7.1e-06 54.3 91 39.6
Cc02_g36550 Coffea canephora HOM05D003683 ORTHO05D004143 9.3e-06 53.9 67 46.3


User provided reference genes

Program Settings