Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 0.0e+00 1306.2 632 100.0
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 0.0e+00 1248.4 632 95.1
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.5e-294 1015.8 646 76.2
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 9.9e-283 976.5 599 76.1
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.1e-281 973.0 638 73.4
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 1.1e-281 973.0 621 74.2
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 2.4e-281 971.8 638 73.2
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 3.5e-280 968.0 638 72.4
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 3.5e-280 968.0 576 79.2
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 3.0e-279 964.9 658 71.1
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.5e-278 962.6 577 77.6
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.5e-278 961.8 644 72.5
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 3.3e-278 961.4 580 76.4
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 3.4e-275 951.4 577 76.8
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 9.9e-275 949.9 632 71.7
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 2.2e-274 948.7 575 75.8
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 9.3e-273 943.3 613 73.1
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 1.2e-272 943.0 629 71.9
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 7.4e-270 933.7 644 69.6
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 4.8e-269 931.0 593 73.2
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.8e-268 929.1 694 65.6
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 3.1e-268 928.3 635 70.4
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 5.3e-268 927.5 598 72.9
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 9.0e-268 926.8 625 70.2
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 4.5e-267 924.5 648 69.4
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 7.6e-267 923.7 575 74.3
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.3e-266 922.9 580 72.9
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 1.7e-266 922.5 580 72.9
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 1.7e-266 922.5 580 74.3
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 2.2e-266 922.2 575 74.3
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 2.9e-266 921.8 599 73.1
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 4.9e-266 921.0 626 68.8
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 1.9e-265 919.1 632 69.0
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 3.2e-265 918.3 573 74.3
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 3.2e-265 918.3 591 72.4
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 4.2e-265 917.9 631 70.0
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 4.2e-265 917.9 606 71.5
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 9.3e-265 916.8 576 73.1
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 1.6e-264 916.0 615 71.2
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.7e-264 915.2 659 67.2
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.8e-263 912.5 591 71.7
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 8.7e-263 910.2 575 73.4
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 2.5e-262 908.7 589 71.1
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 3.3e-262 908.3 584 71.7
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 5.7e-262 907.5 578 72.1
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 5.7e-262 907.5 634 69.9
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.6e-261 906.0 634 68.6
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 3.7e-261 904.8 634 69.1
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 4.8e-261 904.4 633 69.4
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 6.3e-261 904.0 574 72.1
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 1.4e-260 902.9 633 69.4
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.4e-260 902.1 634 67.8
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 6.9e-260 900.6 633 69.2
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 1.2e-259 899.8 598 70.1
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.2e-259 899.8 633 69.2
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 2.6e-259 898.7 642 67.6
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 5.9e-259 897.5 585 71.6
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 3.8e-258 894.8 579 71.8
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 1.9e-257 892.5 576 72.2
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 4.2e-257 891.3 608 68.9
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 9.3e-257 890.2 639 68.1
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.6e-256 888.3 633 68.7
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.3e-255 885.6 575 71.5
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.5e-254 882.9 576 73.4
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.6e-253 879.4 616 67.5
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.6e-253 879.4 597 69.8
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 8.2e-253 877.1 619 67.2
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 1.7e-250 869.4 556 72.1
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 6.5e-250 867.5 633 68.1
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 2.7e-248 862.1 594 70.0
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 4.6e-248 861.3 635 67.6
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 6.7e-247 857.4 583 69.6
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.7e-242 842.8 611 65.0
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.4e-241 839.7 624 66.7
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 3.6e-240 835.1 603 67.2
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 2.3e-239 832.4 603 66.5
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 3.0e-239 832.0 614 66.9
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 1.1e-238 830.1 609 67.5
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 7.4e-238 827.4 599 67.9
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 1.2e-235 820.1 577 68.1
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.2e-235 820.1 610 66.7
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.2e-235 820.1 610 66.7
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 6.5e-234 814.3 608 66.3
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 2.7e-232 808.9 573 65.4
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 3.3e-230 802.0 555 69.2
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 4.4e-230 801.6 626 61.2
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.3e-229 800.0 613 65.4
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 2.8e-229 798.9 616 65.4
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 2.6e-222 775.8 640 61.1
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 3.0e-215 752.3 635 60.3
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 8.3e-213 744.2 573 63.0
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 7.0e-204 714.5 580 58.6
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 7.3e-193 677.9 548 59.7
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 4.0e-191 672.2 584 58.7
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 9.5e-185 651.0 578 55.9
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.8e-183 646.7 581 54.9
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 4.4e-182 642.1 521 61.4
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 1.4e-172 610.5 592 52.2
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 9.6e-169 597.8 631 49.0
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 1.4e-167 594.0 623 49.1
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 3.2e-164 582.8 373 69.4
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 4.2e-132 476.1 518 49.4
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 5.7e-121 439.1 256 78.1
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 2.9e-93 347.1 210 77.1
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 6.0e-78 296.2 211 69.7
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 4.4e-65 253.4 196 58.7
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 9.6e-60 235.7 216 56.5
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 5.3e-50 203.4 107 85.0
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 8.1e-43 179.5 132 60.6
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 5.7e-28 130.2 80 76.2
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 4.5e-25 120.6 101 53.5
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.1e-23 115.9 65 76.9
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 6.1e-22 110.2 78 64.1
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.8e-18 98.6 90 56.7
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.2e-14 85.9 43 88.4
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 3.0e-13 81.3 37 94.6
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 4.4e-12 77.4 39 87.2
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 2.4e-10 71.6 135 35.6


User provided reference genes

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