Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0107000 Salix brachista HOM05D006213 ORTHO05D008107 5.8e-222 773.9 378 100.0
Sabra02G0108200 Salix brachista HOM05D006213 ORTHO05D008107 7.9e-203 710.3 367 94.6
Sabra02G0108400 Salix brachista HOM05D006213 ORTHO05D008107 3.0e-202 708.4 367 94.6
Potri.002G139200 Populus trichocarpa HOM05D006213 ORTHO05D008107 1.1e-151 540.4 367 76.3
Manes.05G056250 Manihot esculenta HOM05D006213 ORTHO05D008107 1.1e-127 460.7 367 64.6
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 2.6e-121 439.5 349 63.6
Thecc.01G397800 Theobroma cacao HOM05D006213 ORTHO05D008107 6.0e-118 428.3 346 63.6
Gohir.A08G139600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 1.0e-117 427.6 371 60.1
CiPaw.13G025000 Carya illinoinensis HOM05D006213 ORTHO05D008107 1.3e-117 427.2 347 62.8
Ciclev10019843m.g Citrus clementina HOM05D006213 ORTHO05D008107 1.3e-117 427.2 367 59.9
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 1.8e-117 426.8 379 58.8
Gohir.D08G160600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 6.7e-117 424.9 349 61.9
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 1.5e-116 423.7 371 59.3
Duzib133G0253 Durio zibethinus HOM05D006213 ORTHO05D008107 2.5e-116 422.9 369 59.6
Dinv44047 Davidia involucrata HOM05D006213 ORTHO05D008107 3.3e-116 422.5 366 57.7
FAN10G1434 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.6e-116 421.8 349 61.0
MBI04_g13842_MAGBIO Magnolia biondii HOM05D006213 ORTHO05D008107 3.6e-115 419.1 374 55.6
ClCG06G000670 Citrullus lanatus HOM05D006213 ORTHO05D008107 1.5e-113 413.7 365 58.4
RcHm_v2.0_Chr1g0346061 Rosa chinensis HOM05D006213 ORTHO05D008107 2.6e-113 412.9 379 57.8
Oeu037443.2 Olea europaea HOM05D006213 ORTHO05D008107 4.5e-113 412.1 347 59.1
FAN06G2734 Fragaria x ananassa HOM05D006213 ORTHO05D008107 9.9e-113 411.0 373 57.6
FAN06G3851 Fragaria x ananassa HOM05D006213 ORTHO05D008107 9.9e-113 411.0 373 57.6
FAN06G4345 Fragaria x ananassa HOM05D006213 ORTHO05D008107 9.9e-113 411.0 373 57.6
CANSAT25G1963 Cannabis sativa HOM05D006213 ORTHO05D008107 1.3e-112 410.6 344 59.6
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 1.3e-112 410.6 366 60.1
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 1.7e-112 410.2 317 65.9
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 2.9e-112 409.5 349 59.9
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 4.9e-112 408.7 373 57.4
HanXRQChr17g0562541 Helianthus annuus HOM05D006213 ORTHO05D008107 6.4e-112 408.3 368 56.8
MELO3C022474.2 Cucumis melo HOM05D006213 ORTHO05D008107 8.4e-112 407.9 365 58.4
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 1.4e-111 407.1 347 58.2
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 5.5e-111 405.2 364 56.6
Sed0013772 Sechium edule HOM05D006213 ORTHO05D008107 1.2e-110 404.1 345 59.4
CsaV3_6G006460 Cucumis sativus L. HOM05D006213 ORTHO05D008107 3.5e-110 402.5 365 57.3
Aqoxy3G02673 Aquilegia oxysepala HOM05D006213 ORTHO05D008107 4.6e-110 402.1 351 58.7
Actinidia30939 Actinidia chinensis HOM05D006213 ORTHO05D008107 1.0e-109 401.0 303 65.0
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 1.8e-109 400.2 347 58.5
AT1G02145 Arabidopsis thaliana HOM05D006213 ORTHO05D008107 2.3e-109 399.8 347 58.5
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 3.9e-109 399.1 347 57.6
Solyc01g089900.4 Solanum lycopersicum HOM05D006213 ORTHO05D008107 5.1e-109 398.7 350 58.3
MSTRG.20674 Avicennia marina HOM05D006213 ORTHO05D008107 6.7e-109 398.3 347 58.2
Sopen01g035740 Solanum pennellii HOM05D006213 ORTHO05D008107 6.7e-109 398.3 348 58.3
CAN.G1585.8 Capsicum annuum HOM05D006213 ORTHO05D008107 8.7e-109 397.9 348 58.0
AL1G10080 Arabidopsis lyrata HOM05D006213 ORTHO05D008107 3.3e-108 396.0 347 58.2
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 3.3e-108 396.0 346 57.8
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 5.6e-108 395.2 344 58.4
CARHR000180 Cardamine hirsuta HOM05D006213 ORTHO05D008107 9.6e-108 394.4 347 58.5
C05p00060 Brassica napus HOM05D006213 ORTHO05D008107 1.6e-107 393.7 344 58.1
BolC5t28793H Brassica oleracea HOM05D006213 ORTHO05D008107 1.6e-107 393.7 344 58.1
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 2.1e-107 393.3 344 58.1
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 3.7e-107 392.5 348 58.0
THA.LOC104814061 Tarenaya hassleriana HOM05D006213 ORTHO05D008107 1.4e-106 390.6 378 54.5
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 1.8e-106 390.2 345 57.4
Glyma.07G119300 Glycine max HOM05D006213 ORTHO05D008107 3.1e-106 389.4 346 57.2
Phvul.010G045600 Phaseolus vulgaris HOM05D006213 ORTHO05D008107 5.3e-106 388.7 370 54.3
Sc23g0004890 Simmondsia chinensis HOM05D006213 ORTHO05D008107 5.3e-106 388.7 347 55.3
Lj2g0022411 Lotus japonicus HOM05D006213 ORTHO05D008107 6.9e-106 388.3 346 57.2
Carub.0001s0002 Capsella rubella HOM05D006213 ORTHO05D008107 1.2e-105 387.5 347 56.5
Eucgr.E01545 Eucalyptus grandis HOM05D006213 ORTHO05D008107 1.2e-105 387.5 347 57.6
Sp1g00110 Schrenkiella parvula HOM05D006213 ORTHO05D008107 1.5e-105 387.1 344 58.1
FvH4_7g09360 Fragaria vesca HOM05D006213 ORTHO05D008107 3.4e-105 386.0 373 55.8
Peaxi162Scf00853g00316 Petunia axillaris HOM05D006213 ORTHO05D008107 1.3e-104 384.0 354 56.8
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 1.7e-104 383.6 365 55.1
PSO017G1536 Papaver somniferum HOM05D006213 ORTHO05D008107 3.8e-104 382.5 347 56.2
Medtr8g007345 Medicago truncatula HOM05D006213 ORTHO05D008107 1.4e-103 380.6 345 56.2
PSO837G0013 Papaver somniferum HOM05D006213 ORTHO05D008107 4.2e-103 379.0 347 55.9
Psat4g223120 Pisum sativum HOM05D006213 ORTHO05D008107 7.1e-103 378.3 346 56.4
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 1.8e-101 373.6 348 54.3
AUR62023393 Chenopodium quinoa HOM05D006213 ORTHO05D008107 3.0e-101 372.9 399 48.6
BraA09t42282Z Brassica rapa HOM05D006213 ORTHO05D008107 6.7e-101 371.7 347 56.5
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 3.7e-99 365.9 349 54.4
Lj3g0010513 Lotus japonicus HOM05D006213 ORTHO05D008107 4.8e-99 365.5 294 62.2
BcaC07g42440 Brassica carinata HOM05D006213 ORTHO05D008107 1.1e-98 364.4 345 55.7
Os04g0544900 Oryza sativa ssp. japonica HOM05D006213 ORTHO05D008107 1.1e-98 364.4 347 52.2
Zm00001eb075160 Zea mays HOM05D006213 ORTHO05D008107 1.1e-98 364.4 343 51.6
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 1.4e-98 364.0 364 54.4
A09p69370 Brassica napus HOM05D006213 ORTHO05D008107 5.3e-98 362.1 374 52.4
vmacro13511 Vaccinium macrocarpon HOM05D006213 ORTHO05D008107 1.2e-97 360.9 370 54.1
TPR.G32127 Trifolium pratense HOM05D006213 ORTHO05D008107 2.6e-97 359.8 343 54.5
MD07G1098100 Malus domestica HOM05D006213 ORTHO05D008107 1.7e-96 357.1 263 68.8
BcaB03g13635 Brassica carinata HOM05D006213 ORTHO05D008107 3.2e-95 352.8 344 54.1
Hund17106 Selenicereus undatus HOM05D006213 ORTHO05D008107 1.0e-93 347.8 376 49.7
Nn1g00791 Nelumbo nucifera HOM05D006213 ORTHO05D008107 1.5e-92 344.0 347 50.1
AUR62013761 Chenopodium quinoa HOM05D006213 ORTHO05D008107 9.7e-92 341.3 393 47.6
SGA_v2.0_scaffold52G19244 Striga asiatica HOM05D006213 ORTHO05D008107 3.7e-91 339.3 321 56.7
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 9.1e-90 334.7 347 52.2
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 1.5e-89 334.0 357 48.5
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 2.5e-87 326.6 344 52.0
Thhalv10007459m.g Eutrema salsugineum HOM05D006213 ORTHO05D008107 5.1e-85 318.9 240 66.7
Atru.chr5.108 Acer truncatum HOM05D006213 ORTHO05D008107 1.4e-82 310.8 263 60.8
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 1.0e-80 304.7 355 47.6
BolC8t52928H Brassica oleracea HOM05D006213 ORTHO05D008107 5.0e-80 302.4 392 46.4
Haze_02866 Corylus avellana HOM05D006213 ORTHO05D008107 2.3e-77 293.5 242 63.6
Lj9A554T27 Lonicera japonica HOM05D006213 ORTHO05D008107 9.7e-76 288.1 262 58.0
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 7.0e-74 282.0 295 49.5
Mapoly0044s0100 Marchantia polymorpha HOM05D006213 ORTHO05D008107 1.2e-73 281.2 349 44.4
unitig_8.g3848 Utricularia gibba HOM05D006213 ORTHO05D008107 1.6e-70 270.8 281 48.8
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 3.6e-70 269.6 350 42.6
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 1.6e-65 254.2 349 41.3
SEGI_13726 Sequoiadendron giganteum HOM05D006213 ORTHO05D008107 1.1e-55 221.5 212 53.3
Rhsim07G0037600 Rhododendron simsii HOM05D006213 ORTHO05D008107 1.6e-54 217.6 262 46.9
EL10Ac1g00745 Beta vulgaris HOM05D006213 ORTHO05D008107 1.0e-53 214.9 376 35.4
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 1.8e-53 214.2 135 75.6
PGSC0003DMG402031172 Solanum tuberosum HOM05D006213 ORTHO05D008107 3.4e-52 209.9 136 70.6
DCAR_029492 Daucus carota HOM05D006213 ORTHO05D008107 2.8e-51 206.8 184 56.0
VMungo0331G0117 Vigna mungo HOM05D006213 ORTHO05D008107 2.8e-51 206.8 486 31.9
Cc02_g25210 Coffea canephora HOM05D006213 ORTHO05D008107 1.0e-48 198.4 202 54.0
arahy.Tifrunner.gnm1.ann1.RXQ5U4 Arachis hypogaea HOM05D006213 ORTHO05D008107 2.8e-46 190.3 183 57.4
MCO12G031 Micromonas commoda HOM05D006213 ORTHO05D008107 2.3e-37 160.6 322 34.8
Cc02_g25230 Coffea canephora HOM05D006213 ORTHO05D008107 9.5e-31 138.7 135 48.1
PRCOL_00003622 Prasinoderma coloniale HOM05D006213 ORTHO05D008107 3.6e-30 136.7 254 36.6
SHI13625 Sapria himalayana HOM05D006213 ORTHO05D008107 5.8e-28 129.4 176 42.6
SHI13624 Sapria himalayana HOM05D006213 ORTHO05D008107 3.5e-25 120.2 125 51.2
SGA_v2.0_scaffold340G49332 Striga asiatica HOM05D006213 ORTHO05D008107 3.0e-24 117.1 373 25.5
FAN06G1132 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.5e-12 78.2 50 70.0
arahy.Tifrunner.gnm1.ann1.PL2W5K Arachis hypogaea HOM05D006213 ORTHO05D008107 1.0e-08 65.5 55 49.1
Cc02_g25220 Coffea canephora HOM05D006213 ORTHO05D008107 1.5e-07 61.6 72 45.8


User provided reference genes

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