Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 3.1e-235 818.1 433 100.0
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.0e-153 547.4 434 72.1
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 2.4e-94 350.1 436 48.4
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 8.5e-92 341.7 433 48.0
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 2.5e-91 340.1 438 47.0
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 3.6e-90 336.3 493 43.2
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 4.7e-90 335.9 492 42.9
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 5.1e-89 332.4 436 47.7
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 2.6e-88 330.1 495 42.8
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 3.3e-88 329.7 432 46.3
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 1.7e-87 327.4 433 46.9
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 2.8e-87 326.6 430 46.7
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.4e-86 324.3 436 47.0
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 9.1e-86 321.6 443 45.4
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 4.5e-85 319.3 437 45.8
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 1.3e-84 317.8 429 47.1
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 2.9e-84 316.6 436 45.9
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 8.5e-84 315.1 441 44.2
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.1e-83 314.7 484 43.2
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 1.2e-82 311.2 444 42.8
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.8e-81 307.4 429 45.9
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 5.2e-81 305.8 417 46.0
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 1.5e-80 304.3 438 42.7
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 2.0e-80 303.9 427 45.2
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 3.3e-80 303.1 428 44.9
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 5.7e-80 302.4 438 42.2
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 5.7e-80 302.4 438 44.3
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 5.7e-80 302.4 435 44.8
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 4.8e-79 299.3 364 48.6
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 4.8e-79 299.3 441 41.7
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 8.2e-79 298.5 435 43.4
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.8e-78 297.4 435 43.2
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 2.4e-78 297.0 435 42.8
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.2e-77 294.7 435 43.0
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 2.0e-77 293.9 448 40.6
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 1.3e-76 291.2 366 48.6
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-76 291.2 435 42.8
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.3e-76 291.2 447 40.3
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 8.5e-76 288.5 443 41.3
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 8.5e-76 288.5 435 43.9
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 1.5e-75 287.7 444 40.3
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 1.5e-75 287.7 421 41.6
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 1.5e-75 287.7 443 43.8
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 3.2e-75 286.6 443 41.1
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.5e-75 285.8 435 42.3
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 7.2e-75 285.4 438 43.8
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 9.4e-75 285.0 367 47.4
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.1e-74 283.9 435 42.3
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 2.7e-74 283.5 369 46.6
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 3.0e-73 280.0 427 42.6
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 6.8e-73 278.9 434 43.8
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 1.2e-72 278.1 386 46.1
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 2.0e-72 277.3 369 48.5
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 2.6e-72 276.9 363 48.8
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 4.4e-72 276.2 438 41.1
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 4.4e-72 276.2 438 40.9
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 5.7e-72 275.8 439 41.7
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 9.8e-72 275.0 437 42.8
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 2.2e-71 273.9 445 43.8
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 2.2e-71 273.9 460 43.5
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 2.8e-71 273.5 409 42.8
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 3.7e-71 273.1 365 45.5
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 4.8e-71 272.7 443 39.7
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 3.1e-70 270.0 436 41.7
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 4.1e-70 269.6 420 43.3
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.6e-69 267.7 333 47.4
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 2.0e-69 267.3 447 40.9
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 4.5e-69 266.2 440 41.6
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 6.5e-68 262.3 441 39.5
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 1.1e-67 261.5 441 39.5
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 3.2e-67 260.0 436 41.5
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 5.5e-67 259.2 254 60.2
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 3.0e-65 253.4 418 40.7
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 3.0e-65 253.4 447 37.8
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 1.8e-62 244.2 420 38.3
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 9.1e-62 241.9 365 42.5
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.2e-61 241.5 434 38.2
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 2.5e-59 233.8 477 36.3
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 4.2e-59 233.0 443 36.8
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 1.4e-57 228.0 396 39.4
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.5e-56 224.6 417 37.4
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 5.7e-56 222.6 247 52.2
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 9.8e-56 221.9 286 44.8
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.7e-52 211.1 434 32.9
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 2.9e-52 210.3 263 48.3
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 3.9e-52 209.9 435 33.1
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 3.3e-51 206.8 426 35.2
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 7.3e-51 205.7 437 36.6
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 8.9e-49 198.7 252 48.0
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 1.3e-47 194.9 255 44.7
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.5e-43 181.4 417 33.3
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 2.5e-43 180.6 427 34.9
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 4.3e-43 179.9 568 31.2
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 7.3e-43 179.1 261 46.4
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 7.3e-35 152.5 252 39.3
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 1.8e-33 147.9 115 66.1
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 2.2e-31 141.0 268 35.1
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 3.5e-29 133.7 392 28.1
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 6.8e-25 119.4 233 37.8
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 1.3e-23 115.2 107 56.1
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 4.6e-21 106.7 108 53.7
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 2.3e-20 104.4 89 60.7
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 1.5e-19 101.7 349 24.9
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 9.0e-17 92.4 116 44.8
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.7e-13 80.9 56 64.3
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 3.3e-11 73.9 134 31.3
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 1.3e-10 72.0 88 47.7
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 1.6e-10 71.6 414 22.7
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 8.1e-10 69.3 51 62.7
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 1.4e-09 68.6 93 46.2
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 4.0e-09 67.0 82 48.8
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 5.3e-09 66.6 37 78.4
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 9.0e-09 65.9 71 47.9
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 1.5e-08 65.1 114 36.8
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 2.0e-08 64.7 162 32.7


User provided reference genes

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