Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0105500 Salix brachista HOM05D005488 ORTHO05D006568 6.3e-117 424.1 209 100.0
Potri.014G044300 Populus trichocarpa HOM05D005488 ORTHO05D006568 8.3e-53 211.1 209 60.3
Sabra14G0032200 Salix brachista HOM05D005488 ORTHO05D006568 6.0e-43 178.3 214 54.2
Cfa011024 Carpinus fangiana HOM05D005488 ORTHO05D006568 6.6e-42 174.9 209 52.6
Manes.05G058400 Manihot esculenta HOM05D005488 ORTHO05D006568 8.7e-42 174.5 193 53.4
Haze_02901 Corylus avellana HOM05D005488 ORTHO05D006568 1.3e-40 170.6 206 51.9
CiPaw.14G016900 Carya illinoinensis HOM05D005488 ORTHO05D006568 8.1e-40 167.9 209 50.7
Cc02_g25610 Coffea canephora HOM05D005488 ORTHO05D006568 4.0e-39 165.6 209 48.8
Prupe.2G116500 Prunus persica HOM05D005488 ORTHO05D006568 1.5e-38 163.7 209 49.3
Atru.chr5.75 Acer truncatum HOM05D005488 ORTHO05D006568 2.0e-38 163.3 209 47.4
PGSC0003DMG400001718 Solanum tuberosum HOM05D005488 ORTHO05D006568 2.0e-38 163.3 209 49.8
CiPaw.13G022100 Carya illinoinensis HOM05D005488 ORTHO05D006568 2.6e-38 162.9 209 50.2
Sc26g0001760 Simmondsia chinensis HOM05D005488 ORTHO05D006568 3.4e-38 162.5 210 50.0
Nitab4.5_0005064g0040 Nicotiana tabacum HOM05D005488 ORTHO05D006568 7.6e-38 161.4 209 49.3
Oeu012019.1 Olea europaea HOM05D002442 ORTHO05D006568 7.6e-38 161.4 209 48.8
TWI14G1396 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 9.9e-38 161.0 210 49.0
Atru.chr5.44 Acer truncatum HOM05D005488 ORTHO05D006568 1.3e-37 160.6 120 71.7
Lj3g0015162 Lotus japonicus HOM05D005488 ORTHO05D006568 1.3e-37 160.6 211 46.4
MD07G1091300 Malus domestica HOM05D005488 ORTHO05D006568 1.3e-37 160.6 209 47.4
Medtr8g009280 Medicago truncatula HOM05D005488 ORTHO05D006568 1.3e-37 160.6 209 47.4
RcHm_v2.0_Chr1g0344251 Rosa chinensis HOM05D005488 ORTHO05D006568 1.3e-37 160.6 209 47.4
MD02G1223400 Malus domestica HOM05D005488 ORTHO05D006568 2.2e-37 159.8 209 47.8
Sopen01g035460 Solanum pennellii HOM05D005488 ORTHO05D006568 2.2e-37 159.8 209 48.3
CSS0036750 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 2.9e-37 159.5 209 47.4
Phvul.010G041700 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 2.9e-37 159.5 209 46.9
TWI23G0236 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 2.9e-37 159.5 210 49.0
Nitab4.5_0004088g0020 Nicotiana tabacum HOM05D005488 ORTHO05D006568 3.8e-37 159.1 209 48.8
Glyma.03G103600 Glycine max HOM05D005488 ORTHO05D006568 4.9e-37 158.7 209 47.4
Lalb_Chr03g0040501 Lupinus albus HOM05D005488 ORTHO05D006568 4.9e-37 158.7 207 47.3
Solyc01g088610.4 Solanum lycopersicum HOM05D005488 ORTHO05D006568 6.4e-37 158.3 209 47.8
FvH4_7g08830 Fragaria vesca HOM05D005488 ORTHO05D006568 1.1e-36 157.5 209 46.9
FAN06G3564 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.1e-36 157.5 209 46.9
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea HOM05D005488 ORTHO05D006568 1.4e-36 157.1 211 48.8
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea HOM05D005488 ORTHO05D006568 1.4e-36 157.1 211 48.8
Eucgr.D01184 Eucalyptus grandis HOM05D005488 ORTHO05D006568 1.4e-36 157.1 209 48.3
Oeu034855.1 Olea europaea HOM05D005488 ORTHO05D006568 1.9e-36 156.8 176 51.7
AL5G42420 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 2.4e-36 156.4 210 47.1
FAN10G0732 Fragaria x ananassa HOM05D005488 ORTHO05D006568 2.4e-36 156.4 209 46.9
Lalb_Chr19g0126481 Lupinus albus HOM05D005488 ORTHO05D006568 2.4e-36 156.4 210 47.6
Psat0s4427g0080 Pisum sativum HOM05D005488 ORTHO05D006568 2.4e-36 156.4 209 46.9
Ca_23141_v3 Cicer arietinum L. HOM05D005488 ORTHO05D006568 3.2e-36 156.0 210 46.2
FAN01G0908 Fragaria x ananassa HOM05D005488 ORTHO05D006568 3.2e-36 156.0 209 46.4
FAN03G1834 Fragaria x ananassa HOM05D005488 ORTHO05D006568 3.2e-36 156.0 210 48.1
GSVIVG01018352001 Vitis vinifera HOM05D005488 ORTHO05D006568 3.2e-36 156.0 209 47.8
CAN.G756.18 Capsicum annuum HOM05D005488 ORTHO05D006568 4.2e-36 155.6 209 47.4
FAN10G4236 Fragaria x ananassa HOM05D005488 ORTHO05D006568 5.4e-36 155.2 209 46.9
Gohir.A08G140700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 5.4e-36 155.2 118 69.5
AUR62023368 Chenopodium quinoa HOM05D005488 ORTHO05D006568 7.1e-36 154.8 176 50.0
AUR62013788 Chenopodium quinoa HOM05D005488 ORTHO05D006568 1.2e-35 154.1 209 46.9
Gohir.D08G161700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 1.6e-35 153.7 126 65.9
PGR042G2970 Punica granatum HOM05D005488 ORTHO05D006568 1.6e-35 153.7 210 46.7
EL10Ac1g00715 Beta vulgaris HOM05D005488 ORTHO05D006568 2.1e-35 153.3 209 45.0
CANSAT25G0013 Cannabis sativa HOM05D005488 ORTHO05D006568 2.1e-35 153.3 211 46.9
MELO3C006268.2 Cucumis melo HOM05D005488 ORTHO05D006568 2.1e-35 153.3 212 45.8
MSTRG.17108 Avicennia marina HOM05D005488 ORTHO05D006568 6.0e-35 151.8 176 50.0
Carub.0005s2695 Capsella rubella HOM05D005488 ORTHO05D006568 6.0e-35 151.8 210 47.1
Cpa.g.sc52.71 Carica papaya HOM05D005488 ORTHO05D006568 6.0e-35 151.8 185 49.7
AT3G60210 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 7.8e-35 151.4 211 46.9
COL.COLO4_12353 Corchorus olitorius HOM05D005488 ORTHO05D006568 7.8e-35 151.4 126 63.5
Peaxi162Scf00745g00015 Petunia axillaris HOM05D005488 ORTHO05D006568 1.0e-34 151.0 125 66.4
VMungo0331G0633 Vigna mungo HOM05D005488 ORTHO05D006568 1.0e-34 151.0 178 48.9
DCAR_025027 Daucus carota HOM05D005488 ORTHO05D006568 1.3e-34 150.6 210 47.6
MELO3C022455.2 Cucumis melo HOM05D005488 ORTHO05D006568 1.7e-34 150.2 209 46.4
Thecc.01G402400 Theobroma cacao HOM05D005488 ORTHO05D006568 1.7e-34 150.2 126 62.7
Potri.002G135700 Populus trichocarpa HOM05D005488 ORTHO05D006568 2.3e-34 149.8 202 49.5
Gorai.004G168100 Gossypium raimondii HOM05D005488 ORTHO05D006568 3.0e-34 149.4 126 65.1
Nn6g33696 Nelumbo nucifera HOM05D005488 ORTHO05D006568 5.1e-34 148.7 209 44.5
ClCG06G000860 Citrullus lanatus HOM05D005488 ORTHO05D006568 8.7e-34 147.9 209 45.9
Duzib138G1174 Durio zibethinus HOM05D005488 ORTHO05D006568 8.7e-34 147.9 126 62.7
CsaV3_3G010440 Cucumis sativus L. HOM05D005488 ORTHO05D006568 1.1e-33 147.5 212 45.3
ClCG05G002900 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.9e-33 146.7 213 45.5
PSO063G2958 Papaver somniferum HOM05D005488 ORTHO05D006568 1.9e-33 146.7 209 45.0
PSO782G2409 Papaver somniferum HOM05D005488 ORTHO05D006568 2.5e-33 146.4 204 45.6
Actinidia21613 Actinidia chinensis HOM05D005488 ORTHO05D006568 3.3e-33 146.0 211 46.4
Aa31LG1G26190 Aethionema arabicum HOM05D005488 ORTHO05D006568 5.6e-33 145.2 210 42.9
Hund17125 Selenicereus undatus HOM05D005488 ORTHO05D006568 7.3e-33 144.8 209 43.1
Ciclev10022799m.g Citrus clementina HOM05D005488 ORTHO05D006568 1.3e-32 144.1 118 61.9
SalBow5G2779 Salvia bowleyana HOM05D005488 ORTHO05D006568 2.1e-32 143.3 212 45.8
SGA_v2.0_scaffold52G19266 Striga asiatica HOM05D005488 ORTHO05D006568 2.1e-32 143.3 173 49.7
AL4G43700 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 2.8e-32 142.9 219 43.8
CSS0012976 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 2.8e-32 142.9 212 45.3
HanXRQChr16g0522961 Helianthus annuus HOM05D005488 ORTHO05D006568 2.8e-32 142.9 176 47.2
unitig_26.g8858 Utricularia gibba HOM05D005488 ORTHO05D006568 2.8e-32 142.9 176 45.5
ECA234G4156 Erigeron canadensis HOM05D005488 ORTHO05D006568 3.6e-32 142.5 197 44.2
THA.LOC104827584 Tarenaya hassleriana HOM05D005488 ORTHO05D006568 3.6e-32 142.5 210 42.9
ATR0665G403 Amborella trichopoda HOM05D005488 ORTHO05D006568 4.8e-32 142.1 185 46.5
Migut.N01716 Erythranthe guttata HOM05D005488 ORTHO05D006568 2.4e-31 139.8 209 43.5
Carub.0004s2720 Capsella rubella HOM05D005488 ORTHO05D006568 3.1e-31 139.4 211 44.1
CSS0010758 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 5.3e-31 138.7 210 44.8
Sed0025787 Sechium edule HOM05D005488 ORTHO05D006568 5.3e-31 138.7 211 43.6
AT2G44650 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 6.9e-31 138.3 203 44.3
TPR.G17350 Trifolium pratense HOM05D005488 ORTHO05D006568 1.2e-30 137.5 179 45.3
Migut.B01488 Erythranthe guttata HOM05D005488 ORTHO05D006568 1.5e-30 137.1 177 47.5
Aqoxy3G02564 Aquilegia oxysepala HOM05D005488 ORTHO05D006568 2.0e-30 136.7 208 41.8
CARHR139860 Cardamine hirsuta HOM05D005488 ORTHO05D006568 2.0e-30 136.7 211 44.5
Sed0000336 Sechium edule HOM05D005488 ORTHO05D006568 2.0e-30 136.7 200 44.0
CDE04G3246 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 2.6e-30 136.3 213 40.4
Lsat_1_v5_gn_4_38520 Lactuca sativa HOM05D005488 ORTHO05D006568 3.4e-30 136.0 92 70.7
CDE12G0168 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 5.8e-30 135.2 215 40.5
Sp4g26730 Schrenkiella parvula HOM05D005488 ORTHO05D006568 7.6e-30 134.8 211 42.2
Rhsim01G0143400 Rhododendron simsii HOM05D005488 ORTHO05D006568 1.3e-29 134.0 119 63.0
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 2.9e-29 132.9 118 61.9
Os10g0566700 Oryza sativa ssp. japonica HOM05D005488 ORTHO05D006568 2.9e-29 132.9 173 46.2
Zm00001eb024030 Zea mays HOM05D005488 ORTHO05D006568 4.9e-29 132.1 117 61.5
Thhalv10001677m.g Eutrema salsugineum HOM05D005488 ORTHO05D006568 8.4e-29 131.3 210 41.4
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 1.1e-28 131.0 210 41.9
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 1.4e-28 130.6 209 41.6
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 1.4e-28 130.6 209 41.6
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 1.4e-28 130.6 209 41.6
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 1.4e-28 130.6 209 41.6
Zm00001eb390720 Zea mays HOM05D005488 ORTHO05D006568 1.4e-28 130.6 209 41.1
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 1.9e-28 130.2 210 41.4
BcaB06g29391 Brassica carinata HOM05D005488 ORTHO05D006568 1.9e-28 130.2 120 60.8
BraA04t18803Z Brassica rapa HOM05D005488 ORTHO05D006568 2.4e-28 129.8 210 41.4
BcaC02g07105 Brassica carinata HOM05D005488 ORTHO05D006568 4.2e-28 129.0 210 41.4
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 7.1e-28 128.3 203 40.9
Dinv44023 Davidia involucrata HOM05D005488 ORTHO05D006568 7.9e-27 124.8 160 47.5
unitig_750.g28406 Utricularia gibba HOM05D005488 ORTHO05D006568 1.3e-26 124.0 136 52.9
Duzib133G1397 Durio zibethinus HOM05D005488 ORTHO05D006568 4.3e-25 119.0 111 60.4
A04p33420 Brassica napus HOM05D005488 ORTHO05D006568 7.4e-25 118.2 210 39.0
C04p71170 Brassica napus HOM05D005488 ORTHO05D006568 9.6e-25 117.9 210 39.0
vmacro21078 Vaccinium macrocarpon HOM05D005488 ORTHO05D006568 1.3e-24 117.5 243 36.2
SEGI_24977 Sequoiadendron giganteum HOM05D005488 ORTHO05D006568 1.4e-23 114.0 128 53.9
SMO244G0054 Selaginella moellendorffii HOM05D005488 ORTHO05D006568 4.0e-23 112.5 75 72.0
HPP92_025708 Vanilla planifolia HOM05D005488 ORTHO05D006568 5.3e-23 112.1 159 41.5
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 7.6e-22 108.2 85 57.6
Glyma.07G120400 Glycine max HOM05D005488 ORTHO05D006568 7.6e-22 108.2 90 65.6
Mapoly0181s0002 Marchantia polymorpha HOM05D005488 ORTHO05D006568 1.3e-21 107.5 138 46.4
Dinv43589 Davidia involucrata HOM05D005488 ORTHO05D006568 1.9e-20 103.6 91 65.9
MD13G1240800 Malus domestica HOM05D005488 ORTHO05D006568 1.9e-20 103.6 109 56.0
QL04p026246 Quercus lobata HOM05D005488 ORTHO05D006568 1.9e-20 103.6 140 45.0
Pp3c2_19170 Physcomitrium patens HOM05D005488 ORTHO05D006568 1.0e-18 97.8 74 62.2
Zm00001eb071630 Zea mays HOM05D005488 ORTHO05D006568 8.7e-18 94.7 117 50.4
Phvul.006G055900 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 1.5e-17 94.0 103 55.3
Pp3c1_20880 Physcomitrium patens HOM05D005488 ORTHO05D006568 7.4e-17 91.7 68 61.8
Gohir.D07G176200 Gossypium hirsutum HOM05D005488 ORTHO05D006568 1.0e-13 81.3 53 75.5
Rhsim03G0098500 Rhododendron simsii HOM05D005488 ORTHO05D006568 3.0e-10 69.7 40 82.5
QL04p026254 Quercus lobata HOM05D005488 ORTHO05D006568 1.1e-09 67.8 70 55.7
MD00G1150500 Malus domestica HOM05D005488 ORTHO05D006568 1.3e-08 64.3 37 78.4
Gorai.007G266500 Gossypium raimondii HOM05D005488 ORTHO05D006568 4.1e-07 59.3 44 63.6


User provided reference genes

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