Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0095700 Salix brachista HOM05D012398 ORTHO05D011209 2.2e-42 175.3 92 100.0
Potri.002G121800 Populus trichocarpa HOM05D012398 ORTHO05D011209 1.1e-28 129.8 92 78.3
Potri.014G021250 Populus trichocarpa HOM05D012398 ORTHO05D011209 4.2e-25 117.9 83 78.3
Thecc.08G094600 Theobroma cacao HOM05D012398 ORTHO05D011209 1.2e-14 83.2 89 59.6
Manes.18G043100 Manihot esculenta HOM05D012398 ORTHO05D011209 1.3e-13 79.7 85 61.2
Manes.05G178800 Manihot esculenta HOM05D012738 ORTHO05D011209 1.8e-12 75.9 77 61.0
CiPaw.15G049200 Carya illinoinensis HOM05D012738 ORTHO05D011209 2.7e-11 72.0 85 52.9
COL.COLO4_28570 Corchorus olitorius HOM05D012398 ORTHO05D011209 2.9e-10 68.6 90 48.9
Gohir.A05G206700 Gossypium hirsutum HOM05D012398 ORTHO05D011209 7.3e-09 63.9 92 47.8
TAR381G0619 Trochodendron aralioides HOM05D012738 ORTHO05D011209 1.6e-08 62.8 83 48.2
Gorai.010G023900 Gossypium raimondii HOM05D012398 ORTHO05D011209 3.6e-08 61.6 85 51.8
Glyma.17G237400 Glycine max HOM05D012738 ORTHO05D011209 1.8e-07 59.3 87 44.8
Nn1g04661 Nelumbo nucifera HOM05D012738 ORTHO05D011209 1.8e-07 59.3 89 40.4
Nn5g30445 Nelumbo nucifera HOM05D012738 ORTHO05D011209 1.8e-07 59.3 91 42.9
Gohir.A06G022350 Gossypium hirsutum HOM05D012398 ORTHO05D011209 2.3e-07 58.9 85 50.6
Gorai.009G216600 Gossypium raimondii HOM05D012398 ORTHO05D011209 5.7e-06 54.3 75 44.0
Gohir.D06G019660 Gossypium hirsutum HOM05D012398 ORTHO05D011209 7.5e-06 53.9 33 81.8
RcHm_v2.0_Chr6g0308941 Rosa chinensis HOM05D019937 ORTHO05D011209 9.8e-06 53.5 100 40.0


User provided reference genes

Program Settings