Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 6.0e-46 187.2 97 100.0
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 2.2e-16 89.0 72 62.5
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 3.2e-15 85.1 70 64.3
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 1.6e-14 82.8 69 62.3
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 2.1e-14 82.4 66 63.6
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 2.1e-14 82.4 73 56.2
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 2.7e-14 82.0 69 63.8
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 3.5e-14 81.6 69 62.3
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 7.9e-14 80.5 72 59.7
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 1.0e-13 80.1 69 60.9
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 1.3e-13 79.7 71 56.3
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 1.8e-13 79.3 72 58.3
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 1.8e-13 79.3 72 58.3
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 1.8e-13 79.3 65 60.0
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 1.8e-13 79.3 65 60.0
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 1.8e-13 79.3 71 57.7
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 2.3e-13 79.0 73 56.2
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 2.3e-13 79.0 71 56.3
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 3.0e-13 78.6 71 57.7
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 3.9e-13 78.2 72 55.6
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 8.7e-13 77.0 71 54.9
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 8.7e-13 77.0 71 54.9
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 8.7e-13 77.0 69 58.0
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 8.7e-13 77.0 71 57.7
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 8.7e-13 77.0 72 54.2
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 8.7e-13 77.0 71 59.2
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 1.1e-12 76.6 71 54.9
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 1.1e-12 76.6 69 55.1
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 1.1e-12 76.6 71 57.7
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 1.5e-12 76.3 69 58.0
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 1.5e-12 76.3 66 59.1
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 1.9e-12 75.9 71 53.5
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 2.5e-12 75.5 73 52.1
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 2.5e-12 75.5 70 57.1
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 3.3e-12 75.1 71 54.9
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 3.3e-12 75.1 71 54.9
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 4.3e-12 74.7 71 54.9
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 5.7e-12 74.3 72 58.3
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 5.7e-12 74.3 73 53.4
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 7.4e-12 73.9 72 52.8
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 9.7e-12 73.6 69 56.5
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 1.3e-11 73.2 71 52.1
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 1.3e-11 73.2 66 56.1
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 2.2e-11 72.4 71 52.1
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 2.2e-11 72.4 67 52.2
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 2.8e-11 72.0 71 50.7
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 2.8e-11 72.0 71 53.5
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 3.7e-11 71.6 69 52.2
Gohir.A05G216600 Gossypium hirsutum HOM05D007802 ORTHO05D009879 3.7e-11 71.6 65 56.9
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 6.3e-11 70.9 69 47.8
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 8.2e-11 70.5 65 60.0
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 1.1e-10 70.1 67 55.2
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 1.4e-10 69.7 69 49.3
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 1.4e-10 69.7 68 51.5
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 1.8e-10 69.3 66 56.1
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 3.1e-10 68.6 71 53.5
Aa31LG1G14150 Aethionema arabicum HOM05D007802 ORTHO05D009879 4.1e-10 68.2 72 50.0
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 5.3e-10 67.8 65 53.8
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 5.3e-10 67.8 65 56.9
arahy.Tifrunner.gnm1.ann1.J1FBU0 Arachis hypogaea HOM05D007802 ORTHO05D009879 9.0e-10 67.0 55 61.8
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 1.5e-09 66.2 65 53.8
COL.COLO4_35287 Corchorus olitorius HOM05D007802 ORTHO05D009879 2.0e-09 65.9 72 50.0
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 2.0e-09 65.9 62 53.2
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 2.6e-09 65.5 68 51.5
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 4.5e-09 64.7 70 50.0
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 2.2e-08 62.4 71 49.3
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 3.8e-08 61.6 71 47.9
Nitab4.5_0001601g0070 Nicotiana tabacum HOM05D007802 ORTHO05D009879 1.4e-07 59.7 68 47.1
Nitab4.5_0003852g0060 Nicotiana tabacum HOM05D007802 ORTHO05D009879 1.9e-07 59.3 68 47.1
Aqoxy6G00664 Aquilegia oxysepala HOM05D007802 ORTHO05D009879 2.5e-07 58.9 106 36.8
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 2.5e-07 58.9 68 50.0
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 2.5e-07 58.9 65 46.2
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 3.2e-07 58.5 68 48.5
Glyma.14G183300 Glycine max HOM05D007802 ORTHO05D009879 4.2e-07 58.2 45 64.4
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 5.5e-07 57.8 70 44.3
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 9.3e-07 57.0 71 42.3
Solyc08g016415.1 Solanum lycopersicum HOM05D007802 ORTHO05D009879 9.3e-07 57.0 69 44.9
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 1.2e-06 56.6 69 43.5
SEGI_04889 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 7.9e-06 53.9 69 43.5


User provided reference genes

Program Settings