Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0079600 Salix brachista HOM05D004728 ORTHO05D002375 7.2e-137 490.7 275 100.0
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 2.0e-86 323.2 220 83.6
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 3.0e-18 96.7 203 39.4
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 3.1e-15 86.7 202 36.1
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 9.1e-15 85.1 214 40.7
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 9.1e-15 85.1 164 43.9
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 4.5e-14 82.8 187 46.5
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.0e-13 81.6 196 41.8
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.2e-13 80.5 203 43.8
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.5e-13 79.0 206 39.3
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 8.5e-13 78.6 185 43.2
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 8.5e-13 78.6 155 45.2
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 1.1e-12 78.2 193 40.4
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 2.5e-12 77.0 212 39.6
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 5.5e-12 75.9 158 43.7
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.2e-11 74.7 186 39.8
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 1.2e-11 74.7 183 39.9
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 2.7e-11 73.6 204 37.3
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 3.6e-11 73.2 194 40.7
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 6.1e-11 72.4 192 39.6
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 4.0e-10 69.7 118 50.0
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 6.7e-10 68.9 189 40.2
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 8.8e-10 68.6 189 46.0
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.6e-09 67.0 154 40.9
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 3.3e-09 66.6 174 39.7
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 4.4e-09 66.2 155 45.2
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 5.7e-09 65.9 114 52.6
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 5.7e-09 65.9 132 44.7
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 2.8e-08 63.5 150 41.3
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 3.7e-08 63.2 131 41.2
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 3.7e-08 63.2 123 46.3
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 3.7e-08 63.2 171 39.2
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 3.7e-08 63.2 175 34.9
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 4.8e-08 62.8 167 38.9
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.8e-08 62.8 102 50.0
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.3e-08 62.4 102 53.9
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.1e-07 61.6 121 31.4
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.1e-07 61.6 121 31.4
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.1e-07 61.6 187 39.0
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.1e-07 61.6 102 52.9
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.1e-07 61.6 102 52.9
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.1e-07 61.6 148 39.2
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.1e-07 61.6 158 38.6
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 1.4e-07 61.2 171 39.2
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 1.8e-07 60.8 162 36.4
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-07 60.5 125 46.4
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 2.4e-07 60.5 193 29.5
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 2.4e-07 60.5 200 34.0
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 3.1e-07 60.1 102 53.9
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.3e-07 59.3 148 41.9
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 7.0e-07 58.9 154 30.5
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.2e-06 58.2 128 44.5
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.2e-06 58.2 139 30.2
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.6e-06 57.8 174 37.4
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 2.0e-06 57.4 183 34.4
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 2.7e-06 57.0 102 50.0
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 2.7e-06 57.0 123 47.2
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 2.7e-06 57.0 164 36.0
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 3.5e-06 56.6 161 37.3
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 4.5e-06 56.2 167 37.1
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.5e-06 56.2 129 43.4
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 4.5e-06 56.2 216 33.3
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 5.9e-06 55.8 132 30.3
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 5.9e-06 55.8 175 28.6
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 5.9e-06 55.8 151 39.7
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 5.9e-06 55.8 115 47.0
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 7.7e-06 55.5 207 34.8


User provided reference genes

Program Settings