Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 4.0e-221 771.2 402 100.0
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 3.7e-198 694.9 435 85.3
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 2.6e-143 512.7 435 65.5
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 8.1e-129 464.5 435 58.9
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 1.3e-126 457.2 437 57.2
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 2.9e-126 456.1 436 58.7
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 2.4e-125 453.0 437 57.2
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 1.3e-123 447.2 435 57.9
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 1.6e-121 440.3 433 57.5
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 2.8e-121 439.5 436 56.0
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.1e-120 437.6 435 56.1
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 2.6e-119 433.0 435 55.2
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 7.6e-119 431.4 435 55.2
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 9.9e-119 431.0 439 56.7
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.4e-117 427.2 435 54.5
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 1.9e-117 426.8 441 56.0
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 3.2e-117 426.0 431 55.2
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 2.1e-116 423.3 384 59.9
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 6.0e-116 421.8 440 55.2
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 7.8e-116 421.4 398 58.0
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 7.8e-116 421.4 383 58.7
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 2.5e-114 416.4 443 54.2
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 5.6e-114 415.2 447 53.5
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 9.6e-114 414.5 431 54.8
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 9.6e-114 414.5 424 53.5
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 8.1e-113 411.4 447 54.4
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 5.2e-112 408.7 424 53.1
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 6.9e-112 408.3 454 52.9
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 5.8e-111 405.2 440 53.2
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 1.3e-110 404.1 406 54.7
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 2.2e-110 403.3 441 53.7
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 4.9e-110 402.1 440 51.8
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 9.3e-109 397.9 416 55.8
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 2.1e-108 396.7 435 52.2
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 1.9e-106 390.2 379 58.8
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 2.5e-106 389.8 406 54.7
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 5.6e-106 388.7 451 52.1
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 3.1e-104 382.9 431 50.6
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 1.2e-103 380.9 431 50.6
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 4.5e-103 379.0 438 48.9
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 2.9e-102 376.3 430 51.6
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 4.2e-101 372.5 430 49.5
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 9.3e-101 371.3 428 50.2
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 9.3e-101 371.3 442 48.4
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 2.1e-100 370.2 431 50.1
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 3.5e-100 369.4 445 49.0
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 1.0e-99 367.9 427 51.1
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 2.3e-99 366.7 431 49.2
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 3.0e-99 366.3 390 53.3
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 3.0e-99 366.3 413 52.3
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 3.0e-99 366.3 430 50.0
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 3.9e-99 365.9 449 48.8
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 5.1e-99 365.5 390 53.3
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 6.7e-99 365.2 381 55.1
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 6.7e-99 365.2 380 54.7
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 1.9e-98 363.6 443 49.4
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 3.3e-98 362.8 431 50.3
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 4.3e-98 362.5 392 52.0
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 9.6e-98 361.3 432 49.3
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 1.6e-97 360.5 457 47.5
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 3.6e-97 359.4 431 49.0
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 2.4e-96 356.7 467 47.5
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 4.0e-96 355.9 391 51.4
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 6.9e-96 355.1 438 47.5
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 3.4e-95 352.8 429 48.0
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 4.2e-93 345.9 437 47.8
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 9.3e-93 344.7 388 51.0
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 1.2e-92 344.4 393 49.4
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 3.5e-92 342.8 388 49.5
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 7.9e-92 341.7 395 50.4
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 5.3e-88 328.9 524 42.7
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 6.9e-88 328.6 444 45.0
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 2.9e-86 323.2 390 48.2
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 5.5e-85 318.9 432 47.5
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 1.0e-83 314.7 305 56.1
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 1.8e-83 313.9 419 43.4
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 1.1e-82 311.2 317 55.8
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 2.5e-82 310.1 388 45.4
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 5.7e-82 308.9 387 45.2
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 1.8e-80 303.9 436 42.4
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 3.1e-80 303.1 431 44.8
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 3.2e-77 293.1 330 50.6
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 1.6e-76 290.8 431 42.7
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 1.0e-75 288.1 438 41.3
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 6.7e-75 285.4 348 49.4
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 1.9e-74 283.9 551 38.3
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 4.5e-71 272.7 323 47.7
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 2.9e-70 270.0 368 46.5
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 1.0e-67 261.5 354 41.8
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 3.3e-66 256.5 345 44.1
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 1.7e-62 244.2 384 37.0
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 1.0e-59 235.0 216 57.9
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 1.4e-59 234.6 389 40.6
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 1.8e-59 234.2 337 43.6
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 6.3e-57 225.7 286 45.1
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 8.2e-57 225.3 430 36.3
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 3.2e-53 213.4 249 48.2
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 4.2e-53 213.0 157 66.9
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 2.0e-50 204.1 388 37.4
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 5.7e-50 202.6 410 36.6
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 8.5e-46 188.7 198 54.5
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 1.5e-37 161.4 262 41.2
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 1.9e-37 161.0 319 33.5
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 8.0e-36 155.6 384 32.0
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 8.8e-35 152.1 385 31.9
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 6.3e-33 146.0 404 29.2
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 1.5e-29 134.8 371 28.6
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 2.3e-27 127.5 124 62.1
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 2.9e-25 120.6 87 67.8
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 4.1e-24 116.7 144 49.3
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 1.7e-22 111.3 407 26.0
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 7.3e-21 105.9 128 50.8
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 1.9e-16 91.3 81 55.6
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 4.6e-15 86.7 114 47.4
Thhalv10015964m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 3.3e-13 80.5 125 44.0
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 1.8e-11 74.7 161 35.4
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 9.2e-08 62.4 217 30.9
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 3.5e-07 60.5 58 51.7
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 1.3e-06 58.5 77 45.5
Medtr7g062690 Medicago truncatula HOM05D006045 ORTHO05D007678 1.7e-06 58.2 69 50.7


User provided reference genes

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