Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 2.2e-91 339.0 174 100.0
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.6e-73 279.6 178 83.1
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.5e-60 236.5 178 73.0
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.0e-59 233.8 177 72.3
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.7e-51 206.5 180 67.8
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 2.5e-50 202.6 179 60.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.7e-47 191.4 181 62.4
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 4.8e-46 188.3 181 58.0
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 6.3e-46 188.0 167 59.9
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.5e-44 181.8 187 57.2
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 7.7e-44 181.0 189 56.1
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.3e-43 180.3 189 56.1
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 2.9e-43 179.1 166 57.8
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 3.0e-40 169.1 191 52.9
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.5e-39 166.8 185 50.3
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 2.8e-38 162.5 203 51.2
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 7.0e-37 157.9 175 53.7
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 1.7e-35 153.3 171 55.0
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 2.9e-35 152.5 170 55.3
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.5e-34 149.4 170 52.9
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 5.5e-34 148.3 186 50.5
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 7.2e-34 147.9 183 49.7
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 1.6e-33 146.7 187 48.1
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 2.7e-33 146.0 170 53.5
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 2.7e-33 146.0 170 53.5
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 4.7e-33 145.2 194 48.5
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.8e-32 143.3 194 49.5
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 3.0e-32 142.5 181 49.7
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 2.6e-31 139.4 192 47.9
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 5.7e-31 138.3 193 47.2
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 2.8e-30 136.0 196 45.9
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 2.8e-30 136.0 182 47.8
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 4.8e-30 135.2 178 48.3
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 8.3e-30 134.4 177 47.5
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 1.1e-29 134.0 191 42.4
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 1.8e-29 133.3 195 44.1
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 1.8e-29 133.3 190 47.9
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 7.0e-29 131.3 178 48.3
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.2e-28 130.6 167 43.7
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.2e-28 130.6 189 47.1
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.6e-28 130.2 188 48.4
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.7e-28 129.4 188 48.4
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.5e-28 128.6 188 47.9
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 4.5e-28 128.6 176 46.6
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 2.9e-27 125.9 190 41.6
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 6.5e-27 124.8 177 44.1
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 8.6e-27 124.4 164 47.0
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.1e-26 124.0 169 45.6
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 1.5e-26 123.6 177 45.2
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 1.9e-26 123.2 203 41.9
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 3.3e-26 122.5 164 47.6
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 5.5e-26 121.7 168 45.8
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.5e-26 121.7 173 45.1
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 7.2e-26 121.3 228 36.8
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 2.8e-25 119.4 188 44.7
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 4.7e-25 118.6 184 44.0
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 1.0e-24 117.5 184 43.5
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.4e-24 117.1 174 43.1
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.8e-24 116.7 166 46.4
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 6.8e-24 114.8 174 42.0
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.2e-23 114.0 178 42.1
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 1.5e-23 113.6 173 42.2
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.4e-23 112.1 178 42.1
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.7e-22 110.2 178 39.9
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 2.2e-22 109.8 180 43.3
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 2.2e-22 109.8 180 40.0
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 2.8e-22 109.4 177 42.4
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.8e-22 109.4 177 39.0
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 2.8e-22 109.4 187 42.8
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 3.7e-22 109.0 155 47.7
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 4.9e-22 108.6 178 39.3
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 4.9e-22 108.6 171 45.0
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 6.3e-22 108.2 178 42.1
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 8.3e-22 107.8 182 42.9
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 8.3e-22 107.8 182 42.9
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.4e-21 107.1 173 41.0
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 2.4e-21 106.3 172 41.9
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 4.1e-21 105.5 164 42.1
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 2.7e-20 102.8 189 38.1
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 2.7e-20 102.8 189 38.1
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 5.9e-20 101.7 167 41.3
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 7.8e-20 101.3 203 35.5
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 1.1e-18 97.4 131 46.6
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.9e-18 96.7 173 38.7
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.9e-18 96.7 163 42.9
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 4.3e-18 95.5 212 36.8
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 4.3e-18 95.5 146 39.7
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 9.5e-18 94.4 171 37.4
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 1.2e-17 94.0 171 36.8
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 2.8e-17 92.8 181 39.8
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 4.7e-17 92.0 189 39.7
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 1.8e-16 90.1 181 35.9
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 2.6e-15 86.3 163 36.8
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 1.7e-14 83.6 171 33.9
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 7.0e-13 78.2 162 37.0
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 4.6e-12 75.5 171 36.8
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 7.8e-12 74.7 210 30.0
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.3e-11 73.9 118 40.7
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 2.3e-11 73.2 190 34.2
Zm00001eb216790 Zea mays HOM05D049283 ORTHO05D049509 9.5e-10 67.8 148 33.8
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 8.0e-09 64.7 151 35.8
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 2.3e-08 63.2 166 33.7
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 2.3e-08 63.2 166 33.7
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 6.8e-08 61.6 169 33.7
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 1.5e-07 60.5 142 36.6
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 1.5e-07 60.5 122 35.2
HanXRQChr02g0037031 Helianthus annuus HOM05D007182 ORTHO05D008919 3.4e-07 59.3 189 31.2
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 9.8e-07 57.8 168 32.7


User provided reference genes

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