Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 2.5e-74 282.0 136 100.0
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 8.1e-73 276.9 136 97.8
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 3.4e-71 271.6 136 96.3
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 7.5e-71 270.4 136 95.6
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.7e-70 269.2 136 94.9
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 3.7e-70 268.1 136 94.1
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 8.3e-70 266.9 136 92.6
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 1.1e-69 266.5 136 92.6
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 1.4e-69 266.2 136 94.1
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 1.4e-69 266.2 136 92.6
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.4e-69 265.4 136 92.6
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 3.2e-69 265.0 136 92.6
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 3.2e-69 265.0 136 92.6
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 3.2e-69 265.0 136 92.6
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 3.2e-69 265.0 135 93.3
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 4.1e-69 264.6 136 93.4
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 4.1e-69 264.6 136 91.2
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 7.1e-69 263.8 136 91.2
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 9.2e-69 263.5 136 91.9
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 1.2e-68 263.1 136 90.4
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.2e-68 263.1 136 91.2
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.2e-68 263.1 136 91.2
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.2e-68 263.1 136 91.2
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 1.2e-68 263.1 136 91.2
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 1.6e-68 262.7 136 92.6
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 2.1e-68 262.3 136 91.9
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.7e-68 261.9 136 91.2
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 2.7e-68 261.9 136 89.7
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 2.7e-68 261.9 136 91.2
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 1.0e-67 260.0 136 89.7
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.0e-67 260.0 136 89.7
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.0e-67 260.0 136 89.7
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.0e-67 260.0 136 89.7
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 1.3e-67 259.6 136 89.7
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 1.3e-67 259.6 136 89.7
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 1.7e-67 259.2 136 90.4
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 5.1e-67 257.7 136 89.7
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 6.6e-67 257.3 136 88.2
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 6.6e-67 257.3 136 88.2
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 1.1e-66 256.5 136 88.2
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 1.9e-66 255.8 135 88.1
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 3.3e-66 255.0 136 88.2
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 3.3e-66 255.0 136 89.7
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 4.3e-66 254.6 136 86.8
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 4.3e-66 254.6 136 86.8
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 4.3e-66 254.6 136 86.8
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 4.3e-66 254.6 136 87.5
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 7.3e-66 253.8 135 85.9
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 7.3e-66 253.8 135 87.4
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 9.5e-66 253.4 136 86.0
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 9.5e-66 253.4 136 86.0
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 9.5e-66 253.4 136 86.0
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 9.5e-66 253.4 136 86.0
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.2e-65 253.1 133 88.7
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 1.6e-65 252.7 136 85.3
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 2.1e-65 252.3 136 86.0
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 2.1e-65 252.3 136 84.6
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 2.1e-65 252.3 136 86.0
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 2.8e-65 251.9 136 85.3
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 2.8e-65 251.9 135 85.9
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 3.6e-65 251.5 136 87.5
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 4.7e-65 251.1 136 84.6
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 6.2e-65 250.8 135 85.2
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 8.1e-65 250.4 135 84.4
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 8.1e-65 250.4 136 87.5
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 1.8e-64 249.2 135 87.4
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 4.0e-64 248.1 136 85.3
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 8.9e-64 246.9 134 86.6
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 1.5e-63 246.1 132 88.6
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 1.5e-63 246.1 136 83.8
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 2.0e-63 245.7 136 85.3
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 2.6e-63 245.4 136 84.6
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 2.6e-63 245.4 136 85.3
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 2.6e-63 245.4 136 85.3
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 7.6e-63 243.8 136 83.8
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 9.9e-63 243.4 136 83.1
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 9.9e-63 243.4 136 83.1
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 1.3e-62 243.0 136 83.8
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 1.7e-62 242.7 135 83.7
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 1.7e-62 242.7 136 83.8
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 3.8e-62 241.5 136 82.4
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 4.9e-62 241.1 136 82.4
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 8.4e-62 240.4 136 84.6
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 1.1e-61 240.0 136 81.6
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 1.4e-61 239.6 136 84.6
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 7.1e-61 237.3 138 81.2
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 3.5e-60 235.0 136 81.6
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 4.6e-60 234.6 124 87.9
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 4.6e-60 234.6 130 85.4
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.3e-59 233.0 124 88.7
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 1.3e-59 233.0 124 87.9
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 1.3e-59 233.0 124 88.7
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 8.7e-59 230.3 124 85.5
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 1.1e-58 229.9 129 82.2
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 3.6e-57 224.9 131 78.6
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 3.6e-57 224.9 124 87.1
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 3.6e-57 224.9 119 87.4
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 1.1e-56 223.4 124 88.7
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 2.0e-55 219.2 133 76.7
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 1.3e-54 216.5 133 75.9
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 1.3e-54 216.5 133 75.2
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 4.9e-54 214.5 135 71.9
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 1.4e-53 213.0 138 72.5
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 1.4e-53 213.0 132 72.0
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 4.2e-53 211.5 138 73.9
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 1.2e-52 209.9 206 54.9
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 3.0e-51 205.3 120 80.8
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 1.6e-49 199.5 135 66.7
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 2.8e-49 198.7 131 69.5
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 3.6e-49 198.4 121 79.3
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 6.2e-49 197.6 136 69.1
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 2.4e-45 185.7 153 60.8
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 4.2e-45 184.9 125 76.8
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 9.3e-45 183.7 136 63.2
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 2.7e-44 182.2 92 94.6
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 6.0e-44 181.0 134 62.7
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 3.1e-40 168.7 128 59.4
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 4.6e-36 154.8 76 92.1
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 5.1e-35 151.4 92 76.1
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 5.1e-35 151.4 74 91.9
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 6.7e-35 151.0 74 90.5
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 6.7e-35 151.0 74 90.5
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 1.6e-33 146.4 75 84.0
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 4.8e-33 144.8 74 83.8
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 4.8e-33 144.8 74 83.8
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 1.8e-32 142.9 75 80.0
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 2.0e-31 139.4 74 82.4
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 7.1e-29 131.0 73 78.1
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 1.9e-26 122.9 140 51.4
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 7.4e-26 120.9 76 73.7
Sopen11g008620 Solanum pennellii HOM05D000147 ORTHO05D004360 9.0e-24 114.0 72 77.8
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 4.5e-23 111.7 131 38.9
ClCG03G009140 Citrullus lanatus HOM05D005489 ORTHO05D006629 1.5e-18 96.7 50 96.0
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 3.1e-16 89.0 117 44.4
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 6.9e-16 87.8 47 80.9
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 4.5e-15 85.1 163 39.9
Solyc11g013660.1 Solanum lycopersicum HOM05D005489 ORTHO05D006629 1.1e-10 70.5 70 57.1
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 1.1e-08 63.9 35 74.3
Os08g0469200 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 5.3e-08 61.6 67 49.3
PRCOL_00003098 Prasinoderma coloniale HOM05D001685 ORTHO05D007488 1.7e-06 56.6 141 30.5


User provided reference genes

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