Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 3.0e-73 278.5 146 100.0
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 6.9e-62 240.7 148 87.2
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 9.6e-48 193.7 153 71.9
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.6e-45 185.7 150 66.0
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 2.5e-43 179.1 147 67.3
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 9.3e-43 177.2 145 64.8
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 3.5e-42 175.3 151 63.6
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 1.3e-41 173.3 151 63.6
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 3.0e-41 172.2 148 64.9
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 5.1e-41 171.4 142 65.5
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.9e-40 169.5 144 62.5
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 1.9e-40 169.5 144 62.5
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.3e-39 166.8 148 62.2
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 4.8e-39 164.9 151 60.9
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 4.8e-39 164.9 144 61.1
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 6.3e-39 164.5 144 61.1
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 8.2e-39 164.1 144 60.4
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 1.1e-38 163.7 142 63.4
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 1.1e-38 163.7 153 63.4
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 3.1e-38 162.2 131 65.6
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 3.1e-38 162.2 131 65.6
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 3.1e-38 162.2 139 61.9
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 4.1e-38 161.8 152 60.5
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 4.1e-38 161.8 145 58.6
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 6.9e-38 161.0 136 64.7
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.5e-37 159.8 144 59.0
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 2.0e-37 159.5 138 62.3
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 5.9e-37 157.9 138 60.9
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 1.0e-36 157.1 144 58.3
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.3e-36 156.8 145 58.6
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 2.9e-36 155.6 145 59.3
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 1.4e-35 153.3 135 61.5
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 1.9e-35 152.9 144 59.0
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 3.2e-35 152.1 139 60.4
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 3.2e-35 152.1 141 61.0
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 4.2e-35 151.8 142 57.7
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 4.2e-35 151.8 139 61.2
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 4.2e-35 151.8 138 59.4
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 4.2e-35 151.8 145 56.6
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 5.5e-35 151.4 138 60.9
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 5.5e-35 151.4 132 63.6
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 1.2e-34 150.2 141 59.6
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 1.6e-34 149.8 141 60.3
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 1.6e-34 149.8 141 60.3
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 1.6e-34 149.8 141 60.3
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 2.1e-34 149.4 130 64.6
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 3.6e-34 148.7 156 57.7
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 4.6e-34 148.3 138 58.0
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 1.0e-33 147.1 133 63.9
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 1.8e-33 146.4 129 62.0
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 3.9e-33 145.2 150 54.0
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 5.1e-33 144.8 135 57.0
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 5.1e-33 144.8 143 55.9
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 6.7e-33 144.4 148 54.1
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 6.7e-33 144.4 149 55.7
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 3.3e-32 142.1 129 58.9
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 7.4e-32 141.0 140 53.6
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.2e-31 139.4 144 52.8
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.8e-31 139.0 136 58.1
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.1e-30 137.1 136 56.6
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 1.4e-30 136.7 135 54.1
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 1.8e-30 136.3 134 56.0
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 2.4e-30 136.0 136 56.6
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 3.1e-30 135.6 133 59.4
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 3.1e-30 135.6 135 54.1
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 1.5e-29 133.3 140 54.3
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 1.5e-29 133.3 136 55.9
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 2.0e-29 132.9 141 56.7
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 2.0e-29 132.9 128 57.8
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 2.9e-28 129.0 132 56.1
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 6.5e-28 127.9 134 55.2
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 1.4e-27 126.7 139 55.4
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 1.4e-27 126.7 139 55.4
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 1.9e-27 126.3 147 50.3
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 3.2e-27 125.6 134 49.3
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 3.2e-27 125.6 128 55.5
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 5.5e-27 124.8 135 49.6
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 5.5e-27 124.8 140 48.6
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 9.4e-27 124.0 136 50.7
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 9.4e-27 124.0 128 53.9
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 9.4e-27 124.0 135 51.1
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 4.7e-26 121.7 130 53.1
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 3.9e-25 118.6 129 50.4
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 5.1e-25 118.2 106 60.4
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 6.7e-25 117.9 132 51.5
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 2.0e-24 116.3 126 53.2
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.7e-23 113.2 145 46.2
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 2.2e-23 112.8 90 66.7
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 2.2e-23 112.8 149 50.3
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 2.8e-23 112.5 138 47.8
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 3.7e-23 112.1 219 36.5
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.8e-22 109.8 131 47.3
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 7.0e-22 107.8 130 53.1
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 2.6e-21 105.9 137 51.8
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 3.4e-21 105.5 126 50.0
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 2.2e-20 102.8 76 68.4
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 5.5e-19 98.2 76 61.8
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 1.6e-18 96.7 129 45.7
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 2.7e-18 95.9 128 47.7
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 3.0e-17 92.4 151 41.7
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 3.9e-17 92.0 112 43.8
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 5.2e-17 91.7 126 46.0
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 2.6e-16 89.4 216 32.4
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 4.4e-16 88.6 123 43.1
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 7.4e-16 87.8 131 40.5
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 9.7e-16 87.4 112 43.8
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 2.2e-15 86.3 104 51.0
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.8e-14 83.2 132 44.7
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 3.5e-13 79.0 123 39.0
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 3.5e-13 79.0 129 39.5
TPR.G109 Trifolium pratense HOM05D003443 ORTHO05D008640 8.2e-07 57.8 41 73.2


User provided reference genes

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