Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0066600 Salix brachista HOM05D000028 ORTHO05D350100 5.4e-78 294.3 150 100.0
Potri.005G176100 Populus trichocarpa HOM05D000028 ORTHO05D000296 2.1e-13 79.7 126 46.8
Sabra05G0132700 Salix brachista HOM05D000028 ORTHO05D000296 1.5e-11 73.6 126 43.7
Sabra05G0132800 Salix brachista HOM05D000028 ORTHO05D000296 1.5e-11 73.6 126 43.7
Manes.18G075900 Manihot esculenta HOM05D000028 ORTHO05D000296 1.9e-11 73.2 126 43.7
CANSAT25G3250 Cannabis sativa HOM05D000028 ORTHO05D000296 2.2e-10 69.7 128 40.6
Actinidia29459 Actinidia chinensis HOM05D000028 ORTHO05D000296 8.2e-10 67.8 138 38.4
COL.COLO4_12213 Corchorus olitorius HOM05D000028 ORTHO05D000296 1.1e-09 67.4 131 43.5
Duzib224G0002 Durio zibethinus HOM05D000028 ORTHO05D000296 1.5e-08 63.5 127 41.7
Dinv40408 Davidia involucrata HOM05D000028 ORTHO05D000296 2.6e-08 62.8 126 38.1
VMungo1309G1841 Vigna mungo HOM05D000028 ORTHO05D000296 2.6e-08 62.8 142 32.4
GSVIVG01008890001 Vitis vinifera HOM05D000028 ORTHO05D000296 2.6e-08 62.8 126 37.3
CSS0044318 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D000296 4.5e-08 62.0 126 38.1
GSVIVG01008889001 Vitis vinifera HOM05D000028 ORTHO05D000296 4.5e-08 62.0 130 35.4
Gohir.A05G234000 Gossypium hirsutum HOM05D000028 ORTHO05D000296 7.7e-08 61.2 127 40.2
Gorai.009G244700 Gossypium raimondii HOM05D000028 ORTHO05D000296 7.7e-08 61.2 131 38.9
CARHR259370 Cardamine hirsuta HOM05D000028 ORTHO05D000296 1.0e-07 60.8 130 37.7
RhsimUnG0094100 Rhododendron simsii HOM05D000028 ORTHO05D000296 2.2e-07 59.7 128 36.7
Gohir.D05G236300 Gossypium hirsutum HOM05D000028 ORTHO05D000296 3.8e-07 58.9 131 38.2
AT4G08290 Arabidopsis thaliana HOM05D000028 ORTHO05D000296 5.0e-07 58.5 130 36.2
Thecc.08G123000 Theobroma cacao HOM05D000028 ORTHO05D000296 8.5e-07 57.8 126 40.5
VMungo1309G0087 Vigna mungo HOM05D000028 ORTHO05D000296 8.5e-07 57.8 142 30.3
AL6G42030 Arabidopsis lyrata HOM05D000028 ORTHO05D000296 1.1e-06 57.4 130 36.2
Cpa.g.sc36.46 Carica papaya HOM05D000028 ORTHO05D000296 1.1e-06 57.4 126 38.1
Prupe.1G500600 Prunus persica HOM05D000028 ORTHO05D000296 1.1e-06 57.4 129 36.4
PGR044G0449 Punica granatum HOM05D000028 ORTHO05D000296 1.1e-06 57.4 130 33.8
PGR044G2254 Punica granatum HOM05D000028 ORTHO05D000296 1.4e-06 57.0 130 33.1
Phvul.009G123900 Phaseolus vulgaris HOM05D000028 ORTHO05D000296 2.5e-06 56.2 142 29.6
Psat5g133320 Pisum sativum HOM05D000028 ORTHO05D000296 3.2e-06 55.8 129 40.3
Glyma.06G111900 Glycine max HOM05D000028 ORTHO05D000296 4.2e-06 55.5 142 31.0
Lj1g0006760 Lotus japonicus HOM05D000028 ORTHO05D000296 4.2e-06 55.5 142 30.3
VMungo0647G1608 Vigna mungo HOM05D000028 ORTHO05D000296 4.2e-06 55.5 134 33.6
Carub.0006s2685 Capsella rubella HOM05D000028 ORTHO05D000296 5.5e-06 55.1 130 34.6
FAN15G2600 Fragaria x ananassa HOM05D000028 ORTHO05D000296 5.5e-06 55.1 129 32.6
Phvul.009G124000 Phaseolus vulgaris HOM05D000028 ORTHO05D000296 5.5e-06 55.1 142 28.2
Glyma.06G112100 Glycine max HOM05D000028 ORTHO05D000296 7.2e-06 54.7 142 28.9
Sp6g09710 Schrenkiella parvula HOM05D000028 ORTHO05D000296 7.2e-06 54.7 130 35.4
A09p30280 Brassica napus HOM05D000028 ORTHO05D000296 9.4e-06 54.3 130 36.2
BraA09t38596Z Brassica rapa HOM05D000028 ORTHO05D000296 9.4e-06 54.3 130 36.2
Peaxi162Scf00003g05227 Petunia axillaris HOM05D000028 ORTHO05D000296 9.4e-06 54.3 143 31.5


User provided reference genes

Program Settings