Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 1.1e-155 553.1 261 100.0
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.2e-104 383.6 235 78.7
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 3.2e-94 349.0 238 68.5
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 4.2e-94 348.6 241 68.9
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 9.3e-94 347.4 234 69.2
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 9.3e-94 347.4 234 69.2
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 9.3e-94 347.4 234 69.2
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.8e-92 343.2 234 67.9
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.8e-92 343.2 234 67.5
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 2.3e-92 342.8 240 67.5
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 3.0e-92 342.4 239 68.2
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 3.0e-92 342.4 237 68.4
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 3.9e-92 342.0 239 68.2
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 5.7e-91 338.2 235 66.4
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 7.4e-91 337.8 252 64.7
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 4.8e-90 335.1 236 67.4
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 4.8e-90 335.1 251 63.7
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 3.4e-88 328.9 236 66.1
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 4.5e-88 328.6 231 65.8
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.9e-88 328.2 238 64.7
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.3e-87 327.0 241 65.6
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.7e-87 326.6 231 65.4
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 3.8e-87 325.5 237 65.4
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 8.4e-87 324.3 232 65.9
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.1e-86 323.9 238 64.3
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.1e-86 323.9 231 64.9
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.9e-86 323.2 228 64.5
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 2.5e-86 322.8 237 64.1
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.5e-86 322.8 229 66.8
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 3.2e-86 322.4 231 65.4
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 5.5e-86 321.6 229 66.8
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.7e-85 319.3 228 66.7
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 6.1e-85 318.2 231 65.4
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 6.1e-85 318.2 230 62.6
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.0e-84 317.4 237 62.0
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 1.0e-84 317.4 243 61.3
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 3.9e-84 315.5 227 64.8
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.5e-83 313.5 228 62.3
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 2.5e-83 312.8 236 60.2
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.3e-83 312.4 231 62.8
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 3.3e-83 312.4 242 61.6
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 3.3e-83 312.4 231 61.0
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 3.7e-82 308.9 231 61.0
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 8.2e-82 307.8 230 62.6
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.4e-81 307.0 231 60.2
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.4e-81 307.0 228 61.8
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 9.0e-81 304.3 234 62.0
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.2e-80 303.9 238 58.4
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 2.0e-80 303.1 228 60.5
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.3e-79 300.4 228 60.1
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 6.5e-79 298.1 232 60.3
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 1.4e-78 297.0 210 67.6
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 4.2e-78 295.4 230 57.4
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 3.6e-77 292.4 239 59.4
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.4e-76 290.4 271 53.9
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 9.7e-75 284.3 234 58.1
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.2e-74 283.1 227 57.7
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 3.4e-72 275.8 234 57.7
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 4.5e-72 275.4 228 57.5
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 3.8e-71 272.3 232 58.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 3.8e-71 272.3 232 58.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 3.8e-71 272.3 232 58.2
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 3.8e-71 272.3 243 56.0
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 5.5e-70 268.5 209 59.8
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 4.7e-69 265.4 308 48.4
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 2.9e-63 246.1 198 59.1
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 3.3e-59 232.6 187 57.2
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.0e-56 223.4 181 56.9
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 8.3e-50 201.4 236 44.1
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.6e-48 197.2 232 42.7
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 6.5e-47 191.8 115 74.8
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.2e-45 187.6 164 54.9
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 8.0e-45 184.9 238 41.2
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 6.8e-44 181.8 113 72.6
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 5.4e-41 172.2 172 49.4
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.8e-37 159.8 163 49.1
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 5.6e-30 135.6 74 75.7
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 5.6e-30 135.6 74 75.7
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.6e-29 132.9 77 76.6
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.7e-26 124.0 265 32.1
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.4e-25 120.9 69 73.9
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.9e-25 120.6 84 66.7
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 3.2e-25 119.8 248 31.9
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.0e-23 114.8 67 77.6
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.3e-23 114.4 67 76.1
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.9e-23 112.8 67 76.1
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.1e-22 111.3 67 76.1
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 8.1e-21 105.1 139 40.3
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.5e-19 100.9 231 28.1
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.4e-17 93.6 88 55.7
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.5e-16 89.7 56 67.9
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.7e-15 87.4 204 27.9
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 8.6e-15 85.1 60 60.0
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.1e-12 78.2 54 59.3
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 7.6e-11 72.0 58 55.2


User provided reference genes

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