Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 5.2e-88 327.8 177 100.0
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 3.7e-78 295.0 177 87.0
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.0e-72 276.9 177 83.1
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.3e-70 270.0 177 80.2
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.3e-59 233.4 177 71.8
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 3.0e-59 232.3 181 71.8
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.1e-58 230.3 177 75.1
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.5e-58 229.9 181 71.8
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 3.6e-57 225.3 179 71.5
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 4.7e-57 224.9 177 69.5
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 4.7e-57 224.9 177 68.9
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.1e-56 223.8 177 74.0
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.1e-56 223.8 178 70.2
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.8e-56 223.0 180 68.9
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 6.8e-56 221.1 177 73.4
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.2e-55 220.3 178 69.1
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 1.2e-55 220.3 177 68.4
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 2.6e-55 219.2 177 71.2
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 3.4e-55 218.8 179 72.6
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 1.3e-54 216.9 178 69.7
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.7e-54 216.5 178 71.9
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 2.2e-54 216.1 180 67.2
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.2e-54 216.1 182 67.6
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 2.2e-54 216.1 179 65.9
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.9e-54 215.7 182 67.6
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 3.7e-54 215.3 183 67.2
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 4.9e-54 214.9 182 69.8
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 4.9e-54 214.9 178 66.3
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 8.3e-54 214.2 180 66.7
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 8.3e-54 214.2 181 69.1
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.1e-53 213.8 182 66.5
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.1e-53 213.8 182 68.1
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.4e-53 213.4 179 68.2
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 1.4e-53 213.4 179 67.6
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.4e-53 213.4 179 67.6
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 1.9e-53 213.0 177 65.0
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 3.2e-53 212.2 179 67.0
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 4.1e-53 211.8 180 67.8
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 4.1e-53 211.8 182 65.4
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.6e-52 209.9 179 66.5
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.6e-52 209.9 179 66.5
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.6e-52 209.9 178 67.4
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 2.7e-52 209.1 184 66.3
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 4.6e-52 208.4 177 62.7
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 4.6e-52 208.4 177 62.7
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 4.6e-52 208.4 181 68.0
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 6.0e-52 208.0 177 70.6
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 6.0e-52 208.0 178 65.2
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.0e-51 207.2 181 67.4
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.0e-51 207.2 181 67.4
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.0e-51 207.2 180 65.6
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 1.7e-51 206.5 177 66.1
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.7e-51 206.5 177 68.9
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 3.0e-51 205.7 179 66.5
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.0e-51 205.7 178 64.0
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.9e-51 205.3 177 68.4
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 6.6e-51 204.5 184 65.2
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 8.6e-51 204.1 179 69.8
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.1e-50 203.8 178 64.6
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.1e-50 203.8 185 66.5
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.5e-50 203.4 176 67.6
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.9e-50 203.0 178 66.9
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.9e-50 203.0 178 63.5
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.9e-50 203.0 178 69.1
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 4.3e-50 201.8 178 63.5
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 4.3e-50 201.8 180 62.2
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 5.6e-50 201.4 180 65.0
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 7.3e-50 201.1 180 61.7
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 7.3e-50 201.1 179 62.6
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 9.6e-50 200.7 181 63.5
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 9.6e-50 200.7 180 62.2
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.6e-49 198.7 181 62.4
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 3.6e-49 198.7 180 61.7
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 6.2e-49 198.0 182 63.2
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 8.1e-49 197.6 181 65.2
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 8.1e-49 197.6 182 63.7
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 8.1e-49 197.6 182 63.7
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 8.1e-49 197.6 182 65.4
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.1e-48 197.2 174 63.8
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.4e-48 196.8 171 66.1
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 1.8e-48 196.4 179 66.5
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 1.8e-48 196.4 178 61.8
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 3.1e-48 195.7 180 64.4
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 5.2e-48 194.9 183 62.8
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 5.2e-48 194.9 179 63.7
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 6.8e-48 194.5 181 61.9
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 8.9e-48 194.1 181 63.0
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 8.9e-48 194.1 180 66.1
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 8.9e-48 194.1 182 63.7
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 8.9e-48 194.1 182 61.5
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 2.0e-47 193.0 182 62.6
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.0e-47 193.0 115 83.5
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 3.4e-47 192.2 185 63.8
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 3.4e-47 192.2 185 63.8
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.4e-47 191.8 132 75.0
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 7.6e-47 191.0 182 63.2
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 7.6e-47 191.0 127 74.0
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 1.7e-46 189.9 184 62.5
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 4.9e-46 188.3 185 62.2
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 1.1e-45 187.2 181 64.6
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.4e-45 186.8 167 68.9
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.9e-45 186.4 167 64.1
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 4.2e-45 185.3 127 76.4
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.1e-44 183.0 106 84.9
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 2.7e-44 182.6 179 64.2
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.0e-43 180.6 183 60.1
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.7e-43 179.9 182 58.8
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.7e-43 179.9 173 64.7
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 1.7e-43 179.9 114 78.9
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 2.3e-43 179.5 103 87.4
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 1.1e-42 177.2 168 62.5
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 1.5e-42 176.8 106 81.1
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 2.5e-42 176.0 131 71.0
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 1.6e-41 173.3 171 58.5
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 9.3e-37 157.5 110 71.8
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 3.6e-33 145.6 85 84.7
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.2e-31 140.6 133 55.6
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.2e-31 140.6 134 54.5
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 9.9e-31 137.5 144 60.4
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.4e-29 133.7 146 53.4
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 3.2e-29 132.5 179 45.8
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.2e-28 130.6 104 60.6
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 4.6e-28 128.6 115 58.3
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 6.2e-25 118.2 130 53.1
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 1.4e-21 107.1 130 44.6
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 4.2e-21 105.5 104 49.0
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 4.6e-20 102.1 142 49.3
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 3.1e-16 89.4 100 52.0
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 5.9e-07 58.5 98 28.6
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.3e-06 57.4 104 30.8
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.7e-06 57.0 104 29.8
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 1.7e-06 57.0 102 33.3
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.9e-06 56.2 103 29.1
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 2.9e-06 56.2 104 29.8
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 3.8e-06 55.8 98 26.5
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 3.8e-06 55.8 98 27.6
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 3.8e-06 55.8 100 27.0
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 3.8e-06 55.8 101 29.7
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 8.5e-06 54.7 101 28.7
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 8.5e-06 54.7 101 28.7


User provided reference genes

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