Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 8.5e-128 460.3 226 100.0
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 1.0e-88 330.5 169 93.5
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 3.0e-56 222.6 169 64.5
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 3.9e-56 222.2 176 62.5
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 3.7e-54 215.7 173 64.2
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 6.3e-54 214.9 185 60.0
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.4e-53 213.0 173 63.0
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 4.1e-53 212.2 168 63.7
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.0e-52 209.9 172 61.0
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.3e-51 207.2 173 63.0
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 2.5e-50 203.0 160 58.1
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 7.2e-50 201.4 167 63.5
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 4.6e-49 198.7 159 58.5
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 6.1e-49 198.4 159 58.5
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 1.8e-48 196.8 158 61.4
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 1.8e-48 196.8 161 57.8
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 5.1e-48 195.3 163 58.3
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 2.5e-47 193.0 168 54.2
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 5.7e-47 191.8 173 59.5
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 7.4e-47 191.4 156 62.8
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 7.4e-47 191.4 156 62.8
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 7.4e-47 191.4 156 62.8
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 9.7e-47 191.0 175 58.9
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 2.8e-46 189.5 157 62.4
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 9.0e-45 184.5 165 57.6
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 4.5e-44 182.2 149 58.4
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 1.3e-43 180.6 161 53.4
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 1.3e-43 180.6 164 52.4
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 2.2e-43 179.9 177 50.8
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 3.8e-43 179.1 164 55.5
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 1.4e-42 177.2 149 53.7
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 1.4e-42 177.2 178 48.3
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 4.2e-42 175.6 155 54.8
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 5.5e-42 175.3 175 50.3
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 5.5e-42 175.3 175 50.3
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 7.2e-42 174.9 154 56.5
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 7.2e-42 174.9 178 48.3
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 1.2e-41 174.1 136 60.3
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 3.6e-41 172.6 187 47.1
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 3.6e-41 172.6 144 55.6
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 6.1e-41 171.8 160 53.1
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 7.9e-41 171.4 150 55.3
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 2.3e-40 169.9 164 51.8
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 3.9e-40 169.1 209 46.4
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 6.7e-40 168.3 166 51.2
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 6.7e-40 168.3 155 53.5
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 1.1e-39 167.5 172 48.3
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 1.1e-39 167.5 178 48.3
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 1.5e-39 167.2 158 55.7
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 1.5e-39 167.2 169 51.5
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 2.5e-39 166.4 145 55.9
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 2.5e-39 166.4 170 47.6
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 4.3e-39 165.6 162 49.4
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 7.4e-39 164.9 146 53.4
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 2.2e-38 163.3 144 54.2
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 2.8e-38 162.9 160 50.0
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 3.7e-38 162.5 146 56.8
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 3.7e-38 162.5 175 44.0
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 3.7e-38 162.5 144 52.8
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 1.1e-37 161.0 155 53.5
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 1.8e-37 160.2 135 57.0
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 2.4e-37 159.8 163 49.7
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 4.1e-37 159.1 206 43.7
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 6.9e-37 158.3 144 52.8
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 9.1e-37 157.9 145 49.0
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 9.1e-37 157.9 142 54.2
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 9.1e-37 157.9 155 53.5
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 1.2e-36 157.5 157 51.6
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 1.5e-36 157.1 155 52.9
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 2.0e-36 156.8 146 52.7
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 2.6e-36 156.4 144 53.5
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 2.6e-36 156.4 147 49.7
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 4.5e-36 155.6 139 52.5
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 2.2e-35 153.3 142 52.1
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 3.2e-34 149.4 142 50.7
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 3.2e-34 149.4 142 50.7
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 4.2e-34 149.1 139 51.8
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 7.2e-34 148.3 165 51.5
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 9.4e-34 147.9 143 51.0
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 9.4e-34 147.9 132 51.5
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 1.2e-33 147.5 140 48.6
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 1.6e-33 147.1 131 56.5
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 2.7e-33 146.4 174 44.3
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 1.0e-32 144.4 171 44.4
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 2.3e-32 143.3 137 51.1
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 8.8e-32 141.4 143 50.3
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 2.0e-31 140.2 172 46.5
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 2.6e-31 139.8 137 54.0
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 3.3e-31 139.4 164 47.6
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 4.8e-30 135.6 144 45.1
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 3.1e-29 132.9 136 46.3
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 7.0e-29 131.7 134 47.8
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 2.6e-28 129.8 134 40.3
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 5.9e-28 128.6 156 43.6
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 5.9e-28 128.6 134 43.3
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.2e-27 126.7 133 44.4
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 8.5e-27 124.8 158 46.8
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 8.0e-25 118.2 108 47.2
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 1.8e-24 117.1 165 39.4
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 1.8e-24 117.1 137 43.1
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 1.5e-23 114.0 99 55.6
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 9.1e-21 104.8 165 37.6
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 1.3e-19 100.9 64 68.8
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 3.8e-19 99.4 102 49.0
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.2e-11 73.6 60 50.0
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 2.5e-10 70.1 62 50.0
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 8.0e-09 65.1 57 50.9
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 1.8e-08 63.9 76 43.4
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 1.8e-08 63.9 85 38.8


User provided reference genes

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