Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 7.7e-79 297.0 140 100.0
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 2.9e-57 225.3 114 93.9
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 2.4e-48 195.7 112 82.1
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 7.1e-48 194.1 110 80.9
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 9.2e-48 193.7 110 84.5
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.1e-47 192.6 108 85.2
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 2.1e-47 192.6 108 85.2
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.0e-46 190.3 108 84.3
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 1.3e-46 189.9 117 76.1
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 1.7e-46 189.5 113 82.3
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 1.7e-46 189.5 112 78.6
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 2.3e-46 189.1 114 79.8
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 3.0e-46 188.7 113 77.9
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 5.1e-46 188.0 102 84.3
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 6.6e-46 187.6 115 72.2
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 6.6e-46 187.6 119 73.1
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 6.6e-46 187.6 119 73.1
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 6.6e-46 187.6 119 73.1
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 8.6e-46 187.2 114 76.3
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 1.1e-45 186.8 102 81.4
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 1.1e-45 186.8 102 81.4
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 1.1e-45 186.8 102 80.4
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 1.1e-45 186.8 102 81.4
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 1.1e-45 186.8 102 81.4
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 1.1e-45 186.8 102 81.4
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 1.1e-45 186.8 102 80.4
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 1.1e-45 186.8 113 77.0
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 1.9e-45 186.0 102 80.4
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 1.9e-45 186.0 102 80.4
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 1.9e-45 186.0 108 78.7
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 2.5e-45 185.7 101 83.2
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.3e-45 185.3 110 79.1
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.3e-45 185.3 110 79.1
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 3.3e-45 185.3 102 81.4
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 3.3e-45 185.3 105 78.1
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 4.3e-45 184.9 102 82.4
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 5.6e-45 184.5 105 78.1
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 7.3e-45 184.1 117 73.5
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 9.6e-45 183.7 119 69.7
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 9.6e-45 183.7 98 82.7
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 9.6e-45 183.7 110 78.2
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 1.2e-44 183.3 102 81.4
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 1.2e-44 183.3 114 71.9
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 4.7e-44 181.4 110 73.6
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 6.2e-44 181.0 102 78.4
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 6.2e-44 181.0 107 81.3
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 6.2e-44 181.0 108 78.7
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 1.4e-43 179.9 102 79.4
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 3.1e-43 178.7 103 78.6
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 3.1e-43 178.7 103 78.6
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 5.2e-43 177.9 110 72.7
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 5.2e-43 177.9 108 72.2
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 6.9e-43 177.6 102 80.4
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 8.9e-43 177.2 122 67.2
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 2.0e-42 176.0 110 71.8
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 2.6e-42 175.6 107 75.7
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 4.4e-42 174.9 100 80.0
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 4.4e-42 174.9 102 75.5
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 7.6e-42 174.1 102 74.5
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 9.9e-42 173.7 109 72.5
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 9.9e-42 173.7 104 80.8
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 1.3e-41 173.3 113 69.0
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 1.3e-41 173.3 113 69.0
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 1.7e-41 172.9 102 77.5
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 1.7e-41 172.9 100 78.0
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 2.9e-41 172.2 113 69.9
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 4.9e-41 171.4 99 78.8
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 4.9e-41 171.4 111 73.0
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 4.9e-41 171.4 115 73.0
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 6.4e-41 171.0 115 72.2
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 6.4e-41 171.0 116 69.8
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 8.4e-41 170.6 111 71.2
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 8.4e-41 170.6 102 78.4
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 8.4e-41 170.6 109 68.8
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 1.1e-40 170.2 103 74.8
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.1e-40 170.2 114 71.9
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 1.1e-40 170.2 102 74.5
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 1.4e-40 169.9 97 77.3
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.4e-40 169.9 102 72.5
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.9e-40 169.5 111 72.1
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 2.4e-40 169.1 102 76.5
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 3.2e-40 168.7 111 68.5
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 3.2e-40 168.7 111 68.5
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 4.2e-40 168.3 97 76.3
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 7.1e-40 167.5 102 71.6
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 7.1e-40 167.5 102 71.6
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 9.3e-40 167.2 116 69.0
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 1.2e-39 166.8 97 76.3
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 1.6e-39 166.4 115 69.6
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 1.6e-39 166.4 102 76.5
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 1.6e-39 166.4 104 72.1
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 2.7e-39 165.6 102 74.5
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 6.0e-39 164.5 97 76.3
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 6.0e-39 164.5 107 67.3
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 6.0e-39 164.5 109 66.1
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 1.0e-38 163.7 111 69.4
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 1.0e-38 163.7 102 69.6
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 1.7e-38 162.9 119 65.5
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 6.6e-38 161.0 99 69.7
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 8.7e-38 160.6 111 67.6
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 9.6e-37 157.1 95 73.7
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 1.6e-36 156.4 104 68.3
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.1e-36 156.0 131 54.2
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 6.9e-35 151.0 90 72.2
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.5e-34 149.8 131 51.9
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 4.5e-34 148.3 97 69.1
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 5.8e-34 147.9 105 60.0
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.2e-33 146.0 118 58.5
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.2e-33 146.0 118 58.5
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 6.4e-33 144.4 101 62.4
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 4.2e-32 141.7 104 59.6
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.7e-31 139.0 85 71.8
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 6.7e-30 134.4 108 60.2
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 1.1e-29 133.7 77 84.4
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 1.9e-29 132.9 104 56.7
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 3.1e-27 125.6 102 53.9
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 6.9e-27 124.4 76 72.4
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 2.4e-24 115.9 76 63.2
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.2e-23 113.6 75 62.7
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 5.6e-21 104.8 59 78.0
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.6e-20 103.2 102 47.1
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 1.6e-20 103.2 98 49.0
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 5.5e-16 88.2 74 60.8
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.3e-13 78.6 45 75.6
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 6.3e-12 74.7 45 73.3
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 1.4e-11 73.6 54 68.5
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 6.9e-11 71.2 58 58.6


User provided reference genes

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