Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 6.6e-51 203.8 103 100.0
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.0e-47 192.2 104 96.2
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 5.8e-47 190.7 103 93.2
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 7.0e-45 183.7 101 89.1
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 9.2e-45 183.3 106 86.8
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 1.6e-44 182.6 101 88.1
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 1.6e-44 182.6 103 89.3
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 3.5e-44 181.4 104 88.5
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 3.0e-43 178.3 101 87.1
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 5.0e-43 177.6 101 86.1
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 1.6e-41 172.6 104 82.7
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 6.2e-41 170.6 102 84.3
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.1e-40 169.9 104 80.8
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.4e-40 169.5 101 82.2
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.3e-40 168.7 103 82.5
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.3e-40 168.7 103 82.5
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 6.8e-40 167.2 103 81.6
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 1.2e-39 166.4 102 81.4
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 1.5e-39 166.0 101 82.2
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 1.5e-39 166.0 101 82.2
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 4.4e-39 164.5 101 83.2
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 4.4e-39 164.5 101 83.2
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 5.8e-39 164.1 103 79.6
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 9.8e-39 163.3 101 80.2
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 3.7e-38 161.4 101 79.2
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.4e-37 159.5 97 83.5
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 2.4e-37 158.7 102 78.4
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 2.4e-37 158.7 94 83.0
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.2e-37 158.3 106 75.5
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 3.2e-37 158.3 101 75.2
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 9.2e-37 156.8 101 74.3
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.2e-36 156.4 102 77.5
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 1.2e-36 156.4 107 72.9
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 1.6e-36 156.0 109 71.6
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 2.1e-36 155.6 102 77.5
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-36 155.6 106 73.6
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.1e-36 155.6 106 73.6
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 3.5e-36 154.8 100 75.0
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 4.6e-36 154.5 101 76.2
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 4.6e-36 154.5 101 73.3
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 4.6e-36 154.5 105 75.2
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 6.0e-36 154.1 101 79.2
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 7.8e-36 153.7 105 72.4
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 1.7e-35 152.5 105 73.3
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.7e-35 152.5 109 69.7
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 3.0e-35 151.8 101 73.3
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 6.6e-35 150.6 101 73.3
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.5e-34 149.4 102 74.5
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 1.9e-34 149.1 103 68.9
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 2.5e-34 148.7 101 73.3
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 4.3e-34 147.9 101 70.3
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 5.6e-34 147.5 105 68.6
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 9.5e-34 146.7 119 63.9
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.1e-33 145.6 101 67.3
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 2.8e-33 145.2 104 74.0
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 3.6e-33 144.8 110 65.5
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 4.7e-33 144.4 102 66.7
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.1e-32 143.3 104 72.1
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 1.1e-32 143.3 113 65.5
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 1.4e-32 142.9 113 65.5
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.8e-32 142.5 106 67.0
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 2.3e-32 142.1 103 68.9
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 4.0e-32 141.4 113 63.7
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 8.9e-32 140.2 108 67.6
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 8.9e-32 140.2 102 65.7
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.5e-31 139.4 103 68.0
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 2.0e-31 139.0 101 66.3
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 2.6e-31 138.7 105 64.8
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 2.6e-31 138.7 102 66.7
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 3.4e-31 138.3 116 63.8
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 4.4e-31 137.9 116 63.8
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 7.5e-31 137.1 109 62.4
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 1.7e-30 136.0 104 65.4
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 2.2e-30 135.6 105 64.8
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 2.2e-30 135.6 114 64.0
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 2.9e-30 135.2 105 66.7
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 3.7e-30 134.8 113 61.9
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 3.7e-30 134.8 103 68.9
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 4.9e-30 134.4 116 62.9
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 4.9e-30 134.4 116 62.9
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 6.4e-30 134.0 116 62.1
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 6.4e-30 134.0 116 62.1
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 6.4e-30 134.0 107 63.6
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 8.3e-30 133.7 116 61.2
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 8.3e-30 133.7 101 63.4
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.1e-29 133.3 117 61.5
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.1e-29 133.3 104 65.4
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 1.1e-29 133.3 113 63.7
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.4e-29 132.9 119 59.7
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.4e-29 132.9 94 68.1
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.4e-29 132.9 105 67.6
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 1.9e-29 132.5 105 61.9
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 9.2e-29 130.2 107 62.6
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 9.2e-29 130.2 101 65.3
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 2.7e-28 128.6 106 61.3
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 4.6e-28 127.9 103 63.1
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 4.6e-28 127.9 110 60.9
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 6.0e-28 127.5 114 58.8
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 1.3e-27 126.3 105 62.9
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.3e-27 125.6 116 57.8
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 3.0e-27 125.2 114 57.9
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 3.0e-27 125.2 105 59.0
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.0e-27 125.2 94 66.0
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 3.9e-27 124.8 92 65.2
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 5.1e-27 124.4 106 59.4
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 5.1e-27 124.4 102 58.8
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 1.1e-26 123.2 105 57.1
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 1.5e-26 122.9 114 57.0
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 1.5e-26 122.9 106 58.5
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 3.3e-26 121.7 114 56.1
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.6e-25 119.4 106 57.5
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 4.7e-25 117.9 116 57.8
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 4.7e-25 117.9 116 57.8
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 8.1e-25 117.1 93 61.3
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.1e-24 116.7 106 58.5
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 1.8e-24 115.9 102 54.9
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 2.4e-24 115.5 106 55.7
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 6.8e-24 114.0 108 54.6
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 1.5e-23 112.8 110 51.8
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 3.4e-23 111.7 115 56.5
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 1.7e-22 109.4 105 50.5
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 7.1e-21 104.0 113 47.8
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 9.2e-21 103.6 118 46.6
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 7.8e-20 100.5 79 60.8
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 8.7e-19 97.1 108 50.0
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 2.8e-17 92.0 62 74.2
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 2.7e-12 75.5 117 44.4
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.8e-09 65.5 56 62.5
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 5.3e-08 61.2 55 61.8


User provided reference genes

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