Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 3.4e-138 495.0 244 100.0
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 4.3e-101 371.7 244 80.3
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 2.2e-81 306.2 239 65.3
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.9e-80 303.1 246 65.0
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 2.7e-79 299.3 216 68.5
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 3.6e-79 298.9 224 68.8
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 7.9e-79 297.7 216 68.1
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.0e-78 297.4 224 68.8
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 5.1e-78 295.0 239 66.1
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.5e-77 292.7 235 65.5
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 3.3e-77 292.4 241 63.9
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 5.7e-77 291.6 243 63.8
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 9.7e-77 290.8 210 68.6
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 9.7e-77 290.8 245 62.9
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 1.3e-76 290.4 229 66.4
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 1.3e-76 290.4 227 66.5
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 2.2e-76 289.7 235 64.7
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 2.2e-76 289.7 248 62.5
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.8e-76 289.3 235 65.1
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 3.7e-76 288.9 232 64.7
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 6.3e-76 288.1 220 67.3
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 1.1e-75 287.3 224 65.2
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.4e-75 287.0 223 65.0
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.4e-75 287.0 217 67.3
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.4e-75 287.0 219 63.5
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 1.8e-75 286.6 220 65.5
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 3.1e-75 285.8 222 63.1
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 4.1e-75 285.4 205 68.8
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 5.3e-75 285.0 242 60.7
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 9.1e-75 284.3 227 65.6
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 1.5e-74 283.5 222 64.4
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 1.5e-74 283.5 209 67.5
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 2.0e-74 283.1 246 59.3
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.6e-74 282.7 222 64.4
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 2.6e-74 282.7 213 66.2
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 2.6e-74 282.7 246 58.5
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 3.4e-74 282.3 230 64.3
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 3.4e-74 282.3 227 64.3
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 4.5e-74 282.0 210 67.1
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 4.5e-74 282.0 209 66.5
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 1.7e-73 280.0 208 67.3
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 3.8e-73 278.9 211 65.9
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 5.0e-73 278.5 247 59.5
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 1.9e-72 276.6 233 63.9
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 2.5e-72 276.2 207 64.7
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 4.2e-72 275.4 238 58.4
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 5.5e-72 275.0 214 65.4
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.2e-71 273.9 228 62.7
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 3.6e-71 272.3 239 59.4
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 4.7e-71 271.9 236 61.4
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 2.3e-70 269.6 204 65.2
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 3.0e-70 269.2 216 62.5
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 3.0e-70 269.2 207 65.7
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 6.7e-70 268.1 242 59.5
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 8.8e-70 267.7 243 58.8
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 5.7e-69 265.0 215 62.3
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 2.2e-68 263.1 209 64.1
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 2.2e-68 263.1 209 61.2
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 3.7e-68 262.3 240 60.0
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 3.7e-68 262.3 240 60.0
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 1.1e-67 260.8 241 58.9
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.8e-67 260.0 241 58.9
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.8e-67 260.0 241 58.9
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 3.1e-67 259.2 208 64.4
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 5.3e-67 258.5 225 60.4
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 1.2e-66 257.3 243 56.8
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 1.2e-66 257.3 243 56.8
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 5.9e-66 255.0 208 62.0
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.0e-65 254.2 210 60.5
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 1.0e-65 254.2 248 57.7
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 1.3e-65 253.8 252 57.1
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.7e-65 253.4 209 61.2
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 5.0e-65 251.9 209 60.3
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 5.0e-65 251.9 221 59.7
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 1.9e-64 250.0 207 60.9
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 5.5e-64 248.4 219 61.6
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 9.4e-64 247.7 220 57.7
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 1.6e-63 246.9 243 55.6
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.6e-63 246.9 208 62.5
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 3.0e-62 242.7 214 57.5
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 2.0e-61 240.0 239 56.5
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 3.3e-61 239.2 250 55.2
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 9.7e-61 237.7 213 60.1
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 8.2e-60 234.6 206 57.3
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.8e-59 233.4 211 60.2
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 2.4e-59 233.0 240 50.0
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 2.2e-57 226.5 208 59.1
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 2.9e-57 226.1 206 57.3
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.5e-56 223.8 204 56.9
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 1.5e-56 223.8 216 59.3
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 4.2e-56 222.2 210 54.8
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 7.2e-56 221.5 166 66.3
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 9.4e-56 221.1 192 57.8
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 8.8e-54 214.5 245 51.0
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 2.6e-53 213.0 170 60.6
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 5.3e-51 205.3 223 53.4
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 6.5e-49 198.4 175 59.4
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 8.8e-46 188.0 157 63.7
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 2.0e-45 186.8 204 49.0
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 7.5e-45 184.9 199 51.3
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 1.1e-43 181.0 183 54.6
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.9e-41 172.9 222 45.5
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 8.6e-41 171.4 212 46.7
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 6.1e-39 165.2 248 38.7
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 6.1e-39 165.2 198 42.4
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 1.2e-37 161.0 214 41.1
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.4e-37 159.5 115 70.4
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 7.5e-37 158.3 115 64.3
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.1e-35 154.5 192 46.9
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 3.5e-34 149.4 102 71.6
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 7.8e-34 148.3 94 69.1
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.3e-33 147.5 103 68.9
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 3.8e-33 146.0 156 52.6
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 2.3e-30 136.7 82 76.8
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 1.3e-28 131.0 130 55.4
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 2.1e-23 113.6 60 83.3
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 2.3e-22 110.2 131 47.3
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 5.8e-21 105.5 159 40.3
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 1.7e-20 104.0 116 54.3
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 1.6e-18 97.4 104 56.7
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 7.8e-18 95.1 159 40.3
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.3e-17 94.4 112 44.6
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 2.8e-15 86.7 116 48.3
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 3.6e-15 86.3 116 48.3
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 6.4e-12 75.5 84 50.0
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 1.1e-11 74.7 235 26.8
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 9.2e-11 71.6 41 78.0
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-09 67.8 42 76.2


User provided reference genes

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