Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 1.4e-81 306.2 157 100.0
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 6.4e-74 280.8 154 92.9
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 6.5e-58 227.6 156 75.0
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 2.3e-55 219.2 157 72.6
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.1e-54 216.9 157 70.7
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 4.3e-54 214.9 154 68.8
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 4.3e-54 214.9 155 72.3
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 1.3e-53 213.4 157 70.7
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 3.7e-53 211.8 153 71.9
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 3.7e-53 211.8 157 70.7
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 4.8e-53 211.5 153 71.2
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 2.4e-52 209.1 153 71.2
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 3.1e-52 208.8 156 70.5
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 5.3e-52 208.0 153 70.6
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 5.3e-52 208.0 156 70.5
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 5.3e-52 208.0 127 81.1
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 6.9e-52 207.6 157 66.2
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 6.9e-52 207.6 150 67.3
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 9.1e-52 207.2 150 70.0
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 1.2e-51 206.8 153 69.3
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 1.5e-51 206.5 154 67.5
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 3.4e-51 205.3 157 68.8
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 4.5e-51 204.9 158 69.6
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 7.7e-51 204.1 134 73.1
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 7.7e-51 204.1 155 69.7
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 1.0e-50 203.8 154 68.8
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 1.0e-50 203.8 154 68.8
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 1.3e-50 203.4 153 66.7
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 1.7e-50 203.0 152 69.1
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 1.7e-50 203.0 158 68.4
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 2.2e-50 202.6 157 66.2
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 2.9e-50 202.2 127 79.5
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 3.8e-50 201.8 153 68.6
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 5.0e-50 201.4 150 66.7
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 6.5e-50 201.1 154 68.2
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 8.5e-50 200.7 154 68.2
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 1.1e-49 200.3 152 68.4
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 1.4e-49 199.9 153 66.0
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 1.9e-49 199.5 152 69.1
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 2.5e-49 199.1 131 77.1
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 2.5e-49 199.1 157 68.2
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 4.2e-49 198.4 128 74.2
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 7.2e-49 197.6 123 76.4
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 9.4e-49 197.2 131 78.6
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 9.4e-49 197.2 138 71.0
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 9.4e-49 197.2 152 64.5
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 9.4e-49 197.2 128 77.3
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 1.2e-48 196.8 151 62.3
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 2.1e-48 196.1 128 72.7
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 2.7e-48 195.7 148 68.2
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 3.6e-48 195.3 151 62.3
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 4.6e-48 194.9 150 62.0
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 4.6e-48 194.9 126 77.0
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 6.1e-48 194.5 154 68.2
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 6.1e-48 194.5 135 71.9
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 7.9e-48 194.1 157 65.6
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 1.0e-47 193.7 128 72.7
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.0e-47 193.7 154 64.3
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.8e-47 193.0 125 74.4
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 3.0e-47 192.2 123 76.4
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 3.9e-47 191.8 151 62.3
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 5.1e-47 191.4 130 73.1
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 6.7e-47 191.0 154 66.2
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 6.7e-47 191.0 158 62.7
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 1.1e-46 190.3 124 76.6
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 1.5e-46 189.9 122 77.0
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 2.6e-46 189.1 152 61.2
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.6e-46 189.1 128 75.0
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 4.4e-46 188.3 156 64.7
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 5.7e-46 188.0 123 73.2
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 7.4e-46 187.6 150 63.3
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 9.7e-46 187.2 154 65.6
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 9.7e-46 187.2 123 70.7
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 9.7e-46 187.2 151 60.3
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 9.7e-46 187.2 150 60.7
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.7e-45 186.4 156 65.4
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.7e-45 186.4 123 69.1
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 2.8e-45 185.7 149 63.8
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 3.7e-45 185.3 156 65.4
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 1.8e-44 183.0 146 63.0
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 6.9e-44 181.0 132 70.5
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 2.6e-43 179.1 155 62.6
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 3.4e-43 178.7 142 64.8
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 7.7e-43 177.6 147 64.6
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 3.8e-42 175.3 145 60.7
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 6.5e-42 174.5 147 61.9
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 8.5e-42 174.1 157 61.8
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 1.4e-41 173.3 158 59.5
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 1.9e-41 172.9 150 62.7
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 2.5e-41 172.6 145 60.7
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 1.2e-40 170.2 139 60.4
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 6.1e-40 167.9 152 61.2
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 1.0e-39 167.2 148 60.8
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 1.4e-39 166.8 147 63.3
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.8e-39 166.4 131 67.2
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 2.3e-39 166.0 142 58.5
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 3.0e-39 165.6 117 69.2
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 3.9e-39 165.2 156 59.0
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 2.6e-38 162.5 150 60.7
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 7.4e-38 161.0 131 61.8
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 2.2e-37 159.5 126 63.5
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.4e-36 156.8 126 62.7
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 3.1e-36 155.6 134 63.4
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 4.1e-36 155.2 133 63.9
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 7.0e-36 154.5 151 56.3
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 5.0e-34 148.3 152 54.6
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 6.5e-34 147.9 152 54.6
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 1.2e-30 137.1 103 68.9
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 1.7e-29 133.3 121 52.1
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 1.2e-27 127.1 152 49.3
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 1.7e-26 123.2 128 50.0
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.2e-24 117.1 137 48.2
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.3e-21 107.1 130 46.2
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 6.3e-21 104.8 102 55.9
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 1.4e-20 103.6 120 47.5
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 4.1e-20 102.1 130 46.2
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 1.6e-19 100.1 149 42.3
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 3.5e-19 99.0 96 57.3
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 3.8e-18 95.5 92 58.7
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 7.2e-17 91.3 81 51.9
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 5.2e-15 85.1 109 41.3
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 3.7e-13 79.0 84 54.8
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 2.4e-12 76.3 116 43.1
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 4.3e-09 65.5 90 50.0
BcaC08g47102 Brassica carinata HOM05D006402 ORTHO05D008099 1.0e-07 60.8 62 51.6


User provided reference genes

Program Settings