Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0009600 Salix brachista HOM05D007676 ORTHO05D009456 1.1e-204 716.5 360 100.0
Potri.002G012300 Populus trichocarpa HOM05D007676 ORTHO05D009456 2.4e-63 246.9 122 93.4
Eucgr.A01836 Eucalyptus grandis HOM05D007676 ORTHO05D009456 1.4e-15 88.2 124 41.1
QL04p080567 Quercus lobata HOM05D007676 ORTHO05D009456 4.1e-15 86.7 121 38.8
Ciclev10017923m.g Citrus clementina HOM05D007676 ORTHO05D009456 2.0e-14 84.3 115 38.3
THA.LOC104801166 Tarenaya hassleriana HOM05D007676 ORTHO05D009456 3.5e-14 83.6 105 34.3
TWI23G0504 Tripterygium wilfordii HOM05D007676 ORTHO05D009456 4.5e-14 83.2 91 44.0
FvH4_4g18380 Fragaria vesca HOM05D007676 ORTHO05D009456 1.7e-13 81.3 120 33.3
AT5G44265 Arabidopsis thaliana HOM05D007676 ORTHO05D009456 5.0e-13 79.7 115 35.7
Manes.13G144000 Manihot esculenta HOM05D007676 ORTHO05D009456 8.5e-13 79.0 90 41.1
Potri.017G013200 Populus trichocarpa HOM05D007676 ORTHO05D009456 1.1e-12 78.6 90 37.8
VMungo1080G1717 Vigna mungo HOM05D007676 ORTHO05D009456 1.1e-12 78.6 93 40.9
AL8G15740 Arabidopsis lyrata HOM05D007676 ORTHO05D009456 1.5e-12 78.2 115 35.7
FAN12G2565 Fragaria x ananassa HOM05D007676 ORTHO05D009456 1.5e-12 78.2 120 32.5
Glyma.12G204200 Glycine max HOM05D007676 ORTHO05D009456 1.5e-12 78.2 91 38.5
PGR042G0101 Punica granatum HOM05D007676 ORTHO05D009456 2.5e-12 77.4 115 33.9
Atru.chr6.2889 Acer truncatum HOM05D007676 ORTHO05D009456 3.2e-12 77.0 112 33.0
Atru.chr6.2952 Acer truncatum HOM05D007676 ORTHO05D009456 3.2e-12 77.0 112 33.0
BcaC03g16646 Brassica carinata HOM05D007676 ORTHO05D009456 3.2e-12 77.0 114 36.8
A02p28290 Brassica napus HOM05D007676 ORTHO05D009456 3.2e-12 77.0 114 36.8
C02p44830 Brassica napus HOM05D007676 ORTHO05D009456 3.2e-12 77.0 114 36.8
BolC2t10523H Brassica oleracea HOM05D007676 ORTHO05D009456 3.2e-12 77.0 114 36.8
BraA02t07864Z Brassica rapa HOM05D007676 ORTHO05D009456 3.2e-12 77.0 114 36.8
Thhalv10003292m.g Eutrema salsugineum HOM05D007676 ORTHO05D009456 3.2e-12 77.0 115 33.9
Sp2g09080 Schrenkiella parvula HOM05D007676 ORTHO05D009456 5.5e-12 76.3 114 36.0
Carub.0008s0425 Capsella rubella HOM05D007676 ORTHO05D009456 7.2e-12 75.9 114 34.2
RcHm_v2.0_Chr2g0127571 Rosa chinensis HOM05D007676 ORTHO05D009456 9.4e-12 75.5 112 33.0
Lalb_Chr14g0366911 Lupinus albus HOM05D007676 ORTHO05D009456 1.6e-11 74.7 94 39.4
Aa31LG5G2990 Aethionema arabicum HOM05D007676 ORTHO05D009456 2.1e-11 74.3 90 37.8
FvH4_6g26560 Fragaria vesca HOM05D007676 ORTHO05D009456 3.6e-11 73.6 89 38.2
Phvul.005G103800 Phaseolus vulgaris HOM05D007676 ORTHO05D009456 3.6e-11 73.6 122 34.4
Thecc.02G183500 Theobroma cacao HOM05D007676 ORTHO05D009456 3.6e-11 73.6 89 38.2
FAN05G5516 Fragaria x ananassa HOM05D007676 ORTHO05D009456 1.0e-10 72.0 89 37.1
RcHm_v2.0_Chr2g0127591 Rosa chinensis HOM05D007676 ORTHO05D009456 1.0e-10 72.0 89 34.8
CARHR178940 Cardamine hirsuta HOM05D007676 ORTHO05D009456 1.4e-10 71.6 115 33.9
Lj3g0021089 Lotus japonicus HOM05D007676 ORTHO05D009456 1.4e-10 71.6 117 34.2
Lalb_Chr14g0366961 Lupinus albus HOM05D007676 ORTHO05D009456 1.4e-10 71.6 119 33.6
Potri.007G138400 Populus trichocarpa HOM05D007676 ORTHO05D009456 1.4e-10 71.6 122 36.9
Migut.M00162 Erythranthe guttata HOM05D007676 ORTHO05D009456 1.8e-10 71.2 115 35.7
SalBow7G3232 Salvia bowleyana HOM05D007676 ORTHO05D009456 2.3e-10 70.9 117 36.8
Lalb_Chr14g0367061 Lupinus albus HOM05D007676 ORTHO05D009456 4.0e-10 70.1 121 33.9
Prupe.2G079300 Prunus persica HOM05D007676 ORTHO05D009456 4.0e-10 70.1 107 33.6
Carub.0007s1233 Capsella rubella HOM05D007676 ORTHO05D009456 5.2e-10 69.7 126 30.2
Sabra07G0111500 Salix brachista HOM05D007676 ORTHO05D009456 5.2e-10 69.7 120 35.0
SalBow7G3503 Salvia bowleyana HOM05D007676 ORTHO05D009456 6.8e-10 69.3 89 40.4
Gohir.A01G019100 Gossypium hirsutum HOM05D007676 ORTHO05D009456 8.8e-10 68.9 114 35.1
Gorai.002G020000 Gossypium raimondii HOM05D007676 ORTHO05D009456 8.8e-10 68.9 114 35.1
Gohir.D01G017700 Gossypium hirsutum HOM05D007676 ORTHO05D009456 1.2e-09 68.6 114 35.1
Lalb_Chr00c25g0407471 Lupinus albus HOM05D007676 ORTHO05D009456 1.2e-09 68.6 119 31.1
THA.LOC104804054 Tarenaya hassleriana HOM05D007676 ORTHO05D009456 1.2e-09 68.6 123 29.3
MD17G1235700 Malus domestica HOM05D007676 ORTHO05D009456 2.6e-09 67.4 91 33.0
MD06G1108100 Malus domestica HOM05D007676 ORTHO05D009456 4.4e-09 66.6 118 32.2
AL7G24190 Arabidopsis lyrata HOM05D007676 ORTHO05D009456 9.8e-09 65.5 128 31.2
arahy.Tifrunner.gnm1.ann1.0QPA7A Arachis hypogaea HOM05D029628 ORTHO05D009456 1.7e-08 64.7 119 31.1
arahy.Tifrunner.gnm1.ann1.W0QD2B Arachis hypogaea HOM05D029628 ORTHO05D009456 1.7e-08 64.7 119 31.1
Aa31LG7G7230 Aethionema arabicum HOM05D007676 ORTHO05D009456 2.2e-08 64.3 132 27.3
TPR.G6389 Trifolium pratense HOM05D007676 ORTHO05D009456 2.8e-08 63.9 96 34.4
Prupe.3G134200 Prunus persica HOM05D007676 ORTHO05D009456 3.7e-08 63.5 90 33.3
AT4G28395 Arabidopsis thaliana HOM05D007676 ORTHO05D009456 4.8e-08 63.2 128 29.7
arahy.Tifrunner.gnm1.ann1.SH5L4P Arachis hypogaea HOM05D029628 ORTHO05D009456 4.8e-08 63.2 119 31.1
CARHR236140 Cardamine hirsuta HOM05D007676 ORTHO05D009456 1.1e-07 62.0 109 31.2
Ciclev10018195m.g Citrus clementina HOM05D007676 ORTHO05D009456 1.1e-07 62.0 92 32.6
FvH4_4g18390 Fragaria vesca HOM05D007676 ORTHO05D009456 1.4e-07 61.6 113 29.2
FAN07G1701 Fragaria x ananassa HOM05D007676 ORTHO05D009456 1.4e-07 61.6 113 29.2
FAN12G3844 Fragaria x ananassa HOM05D007676 ORTHO05D009456 1.4e-07 61.6 113 29.2
Lalb_Chr00c08g0404761 Lupinus albus HOM05D007676 ORTHO05D009456 1.8e-07 61.2 119 29.4
CAN.G209.28 Capsicum annuum HOM05D007676 ORTHO05D009456 4.1e-07 60.1 124 31.5
Sp7g26360 Schrenkiella parvula HOM05D007676 ORTHO05D009456 5.4e-07 59.7 131 26.0
Medtr2g090350 Medicago truncatula HOM05D007676 ORTHO05D009456 1.2e-06 58.5 97 34.0
FAN12G3363 Fragaria x ananassa HOM05D007676 ORTHO05D009456 1.6e-06 58.2 113 28.3
Peaxi162Scf00050g00313 Petunia axillaris HOM05D007676 ORTHO05D009456 3.5e-06 57.0 100 35.0
Aa31LG7G7240 Aethionema arabicum HOM05D007676 ORTHO05D009456 4.5e-06 56.6 121 27.3
Psat3g118200 Pisum sativum HOM05D000275 ORTHO05D000181 4.5e-06 56.6 89 33.7
MD14G1128300 Malus domestica HOM05D007676 ORTHO05D009456 5.9e-06 56.2 86 34.9


User provided reference genes

Program Settings