Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 2.2e-246 855.1 422 100.0
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 2.0e-223 778.9 447 88.4
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.4e-211 739.6 445 84.7
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 6.6e-182 641.0 444 73.2
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.6e-172 609.8 442 70.8
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.7e-161 573.2 441 64.6
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.7e-158 563.1 442 63.1
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 7.9e-151 537.7 437 62.2
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.3e-148 530.4 441 61.0
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 2.4e-147 526.2 443 62.8
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.3e-145 520.4 448 58.5
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 3.8e-145 518.8 447 60.9
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.1e-144 517.3 448 60.3
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.2e-144 515.8 438 58.9
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 8.7e-142 507.7 437 60.9
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.5e-141 506.9 436 61.0
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 9.6e-141 504.2 437 60.4
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.3e-140 503.8 441 59.0
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.8e-140 502.7 448 58.7
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 6.2e-140 501.5 437 60.0
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 4.0e-139 498.8 437 59.7
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 9.0e-139 497.7 440 58.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 9.0e-139 497.7 449 57.0
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 4.5e-138 495.4 443 58.5
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.7e-137 493.4 435 57.7
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 4.2e-136 488.8 443 58.7
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 5.5e-136 488.4 424 58.5
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 9.3e-136 487.6 423 59.6
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 7.9e-135 484.6 358 65.1
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.0e-134 484.2 440 55.9
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 2.3e-134 483.0 430 57.7
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.0e-134 482.6 458 55.7
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 2.5e-133 479.6 439 54.7
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.7e-133 478.4 435 55.9
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.3e-132 477.2 439 55.8
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 2.2e-132 476.5 435 56.6
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 4.8e-132 475.3 441 54.9
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.8e-132 475.3 346 65.0
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-131 473.8 447 55.5
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.8e-131 473.4 347 65.4
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 3.1e-131 472.6 436 54.8
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 4.1e-131 472.2 433 55.7
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 5.3e-131 471.9 346 65.0
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 6.9e-131 471.5 428 56.8
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 6.9e-131 471.5 435 54.7
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 2.6e-130 469.5 438 54.6
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.4e-130 469.2 438 56.4
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 3.4e-130 469.2 439 54.9
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 4.5e-130 468.8 443 55.8
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 1.0e-129 467.6 443 55.5
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 8.5e-129 464.5 358 63.4
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.1e-128 464.2 372 61.0
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.1e-128 464.2 346 63.6
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.4e-128 463.8 429 56.9
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 3.2e-128 462.6 402 58.7
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 3.2e-128 462.6 427 55.7
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.2e-128 461.5 427 55.7
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 2.1e-127 459.9 444 54.5
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.7e-127 459.5 435 54.3
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 4.6e-127 458.8 431 57.3
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 7.9e-127 458.0 350 63.1
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.0e-126 457.6 441 53.7
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.0e-126 457.6 429 54.3
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.8e-126 456.8 438 55.0
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.3e-126 456.4 438 55.0
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 3.9e-126 455.7 428 56.5
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 8.8e-126 454.5 405 56.0
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.5e-125 453.8 429 54.1
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.5e-125 453.8 434 54.1
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.5e-125 453.8 353 61.8
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.9e-125 453.4 417 54.9
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.5e-125 453.0 400 57.2
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.3e-125 452.6 436 53.9
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 4.3e-125 452.2 420 55.0
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.3e-124 450.7 352 61.4
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.3e-124 450.7 433 54.3
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 1.7e-124 450.3 429 54.3
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 1.7e-124 450.3 429 54.3
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 1.7e-124 450.3 429 54.3
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 2.2e-124 449.9 359 63.0
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 6.3e-124 448.4 433 53.8
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 2.4e-123 446.4 420 54.0
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 3.1e-123 446.0 433 54.5
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 3.1e-123 446.0 361 60.7
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 4.1e-123 445.7 429 53.6
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 4.1e-123 445.7 363 58.7
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 4.1e-123 445.7 245 87.8
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 5.3e-123 445.3 427 54.6
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 1.2e-122 444.1 425 54.8
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.5e-122 443.7 433 52.4
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.5e-122 443.7 359 60.7
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 2.0e-122 443.4 423 54.4
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.0e-122 443.4 438 54.1
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 3.4e-122 442.6 344 62.2
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 5.9e-122 441.8 399 57.1
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 7.7e-122 441.4 350 60.9
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 7.7e-122 441.4 362 59.1
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 7.7e-122 441.4 374 59.4
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 2.2e-121 439.9 423 53.0
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 3.8e-121 439.1 420 53.6
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 5.0e-121 438.7 420 53.1
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 5.0e-121 438.7 438 53.2
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 8.5e-121 438.0 345 60.3
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 8.5e-121 438.0 362 60.2
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.4e-120 437.2 390 58.2
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 3.2e-120 436.0 362 58.6
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 4.2e-120 435.6 347 60.8
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 4.2e-120 435.6 351 59.3
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 5.5e-120 435.3 441 52.4
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.2e-119 434.1 420 52.9
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.2e-119 434.1 420 52.9
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.2e-119 434.1 420 52.9
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 2.7e-119 433.0 421 55.1
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 6.7e-118 428.3 351 59.8
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-117 427.2 348 59.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 2.0e-117 426.8 415 54.7
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 4.4e-117 425.6 418 54.5
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 7.4e-117 424.9 437 50.3
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 7.4e-117 424.9 415 54.5
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 9.7e-117 424.5 421 54.6
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.3e-116 424.1 445 53.0
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-115 421.0 421 51.8
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 7.0e-115 418.3 417 53.5
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 9.1e-115 417.9 417 54.2
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.2e-114 417.5 440 52.5
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 2.6e-114 416.4 416 53.6
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-113 414.5 423 51.1
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-113 413.7 341 59.2
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-111 407.5 332 60.2
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.6e-111 407.1 291 66.3
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.4e-109 399.1 430 48.6
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.7e-108 397.1 346 55.8
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 3.7e-108 396.0 450 49.8
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 7.7e-106 388.3 329 60.2
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.0e-105 387.9 402 51.5
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 7.2e-104 381.7 425 46.8
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.0e-102 377.9 342 53.5
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.7e-100 370.5 274 65.0
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.0e-97 361.3 371 50.7
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.5e-96 355.5 371 50.1
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 9.4e-96 354.8 343 50.7
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.6e-95 354.0 288 63.2
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 1.8e-94 350.5 335 52.8
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.0e-93 347.1 250 64.8
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 3.1e-91 339.7 347 48.7
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.9e-89 333.2 368 47.3
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-86 324.3 348 46.8
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.0e-86 322.8 345 48.1
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 4.4e-85 319.3 365 44.7
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.4e-83 313.5 357 45.4
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.2e-82 311.2 305 52.1
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.0e-82 310.5 338 47.0
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 6.6e-81 305.4 380 42.1
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 1.6e-79 300.8 240 58.3
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 4.0e-78 296.2 237 57.0
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 5.2e-78 295.8 365 43.3
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.9e-76 289.3 358 41.6
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.3e-73 281.2 348 43.7
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 2.5e-72 276.9 389 41.6
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.8e-71 273.5 350 40.0
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 2.6e-69 266.9 237 51.9
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 6.4e-68 262.3 355 39.4
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.6e-66 257.7 346 38.2
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.6e-66 256.1 363 38.3
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 3.9e-65 253.1 298 43.6
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.2e-63 248.1 348 39.1
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.3e-62 243.8 365 39.5
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 2.3e-57 227.3 240 45.4
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.6e-56 222.6 348 35.3
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 2.1e-50 204.1 351 34.8
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 4.0e-38 163.3 136 66.9
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.4e-35 154.8 137 57.7
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 4.0e-30 136.7 154 45.5
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.3e-20 105.1 78 59.0
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.2e-20 104.4 100 45.0
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 8.4e-20 102.4 303 27.4
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 3.3e-16 90.5 78 47.4
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.3e-14 83.2 86 40.7
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.7e-12 78.2 68 42.6
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.5e-08 64.3 112 36.6
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.3e-08 63.5 119 30.3
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 7.4e-08 62.8 34 76.5


User provided reference genes

Program Settings