Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 1.7e-143 512.7 272 100.0
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 4.8e-93 345.1 209 87.6
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 8.8e-79 297.7 209 78.0
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 2.0e-78 296.6 207 76.8
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 4.4e-62 242.3 210 68.1
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 4.9e-61 238.8 210 67.1
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 4.9e-61 238.8 211 65.9
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 1.1e-60 237.7 213 66.7
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 8.6e-58 228.0 212 61.8
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 2.5e-57 226.5 210 63.8
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 2.5e-57 226.5 209 63.2
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 3.3e-57 226.1 207 63.3
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 3.6e-56 222.6 210 62.9
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 4.0e-55 219.2 213 64.8
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 5.2e-55 218.8 215 61.4
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 8.9e-55 218.0 213 62.0
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 2.6e-54 216.5 211 62.1
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.7e-53 213.8 208 59.6
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.7e-53 213.8 211 61.1
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 4.9e-53 212.2 217 60.4
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.1e-52 211.1 208 59.6
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.2e-51 207.6 210 60.5
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.2e-51 207.6 216 60.6
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 1.6e-51 207.2 214 62.6
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 2.0e-51 206.8 215 60.0
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 6.0e-51 205.3 210 61.0
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.3e-50 204.1 215 59.1
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.7e-50 203.8 216 59.7
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.7e-50 203.8 216 59.7
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 8.6e-50 201.4 214 60.7
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 7.3e-49 198.4 216 58.8
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.8e-47 193.7 211 57.8
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.9e-47 191.4 246 54.1
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.5e-46 190.7 214 57.5
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 2.0e-46 190.3 215 54.4
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.6e-46 189.9 211 59.7
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 2.6e-46 189.9 213 58.7
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 7.5e-46 188.3 212 58.0
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 2.9e-45 186.4 216 52.8
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.4e-44 184.1 210 57.1
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 2.4e-44 183.3 215 54.4
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 9.2e-44 181.4 210 56.7
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 2.1e-43 180.3 212 54.7
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 3.0e-42 176.4 211 53.6
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 2.5e-41 173.3 204 55.9
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 3.3e-41 172.9 218 54.1
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 4.3e-41 172.6 192 57.3
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 1.6e-40 170.6 219 52.5
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 4.7e-40 169.1 223 52.5
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 4.7e-40 169.1 220 55.5
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 8.1e-40 168.3 214 54.7
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 5.2e-39 165.6 209 53.6
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 4.4e-38 162.5 210 51.0
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 5.8e-38 162.2 213 50.7
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.1e-36 157.9 211 50.2
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.9e-36 157.1 263 47.5
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.9e-36 157.1 214 50.9
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 4.1e-36 156.0 219 51.6
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 2.7e-35 153.3 217 50.2
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 2.7e-35 153.3 219 48.4
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 6.0e-35 152.1 269 45.7
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 1.0e-34 151.4 217 48.4
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.0e-34 151.4 211 49.8
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.3e-34 151.0 210 51.4
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.3e-34 151.0 218 49.1
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 3.0e-34 149.8 211 50.7
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 8.6e-34 148.3 207 48.8
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 1.1e-33 147.9 212 50.9
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 1.1e-33 147.9 211 50.2
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.1e-33 147.9 193 53.4
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 2.1e-32 143.7 209 50.2
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 2.8e-32 143.3 146 63.0
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.8e-32 143.3 194 50.0
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 1.1e-31 141.4 221 49.8
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.8e-31 140.6 217 47.5
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 1.8e-31 140.6 215 48.8
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 3.1e-31 139.8 125 65.6
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 6.9e-31 138.7 223 46.2
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 1.2e-30 137.9 221 49.3
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.2e-30 137.9 221 49.8
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 2.6e-30 136.7 210 49.0
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 7.6e-30 135.2 222 46.8
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 7.6e-30 135.2 211 47.9
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 2.2e-29 133.7 222 46.8
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.1e-28 131.3 214 44.9
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.9e-28 130.6 212 44.3
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.4e-28 129.0 210 46.2
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 9.3e-28 128.3 212 47.2
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 9.3e-28 128.3 227 44.1
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 1.6e-27 127.5 213 44.6
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 2.1e-27 127.1 211 47.4
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 4.6e-27 125.9 229 47.2
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.3e-26 124.4 209 46.4
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 1.3e-26 124.4 218 45.4
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 1.3e-26 124.4 210 47.1
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 3.0e-26 123.2 209 45.9
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 1.1e-25 121.3 208 45.2
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 1.1e-25 121.3 210 46.2
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 1.1e-25 121.3 208 45.2
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 3.3e-25 119.8 217 41.5
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 9.6e-25 118.2 211 46.4
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.1e-24 117.1 179 50.3
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.1e-24 117.1 179 50.3
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 6.2e-24 115.5 207 43.0
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 6.2e-24 115.5 220 45.0
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 6.2e-24 115.5 189 46.6
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.4e-23 114.4 223 42.2
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 6.9e-23 112.1 215 41.4
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 1.5e-22 110.9 223 41.3
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.3e-21 107.8 213 41.8
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 2.7e-19 100.1 183 44.3
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 6.0e-19 99.0 170 47.1
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 6.7e-18 95.5 223 40.8
Sabra04G0144200 Salix brachista HOM05D005571 ORTHO05D006919 6.7e-18 95.5 57 87.7
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.9e-17 94.0 170 43.5
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 3.3e-17 93.2 179 40.8
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 3.1e-15 86.7 289 36.0
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 1.5e-14 84.3 87 56.3
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 1.5e-14 84.3 102 52.9
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 4.5e-14 82.8 180 38.9
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.5e-14 82.8 145 43.4
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 5.8e-14 82.4 171 42.1
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 7.6e-14 82.0 171 40.9
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 7.6e-14 82.0 171 40.9
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 2.2e-13 80.5 173 39.9
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 8.4e-13 78.6 160 40.0
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 8.4e-13 78.6 160 40.0
Thecc.04G308600 Theobroma cacao HOM05D005571 ORTHO05D006919 7.1e-12 75.5 79 55.7
Thecc.06G128900 Theobroma cacao HOM05D005571 ORTHO05D006919 1.0e-10 71.6 73 56.2
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 3.9e-10 69.7 189 38.6
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 3.9e-10 69.7 206 36.9
Thecc.07G149400 Theobroma cacao HOM05D005571 ORTHO05D004433 1.9e-09 67.4 68 55.9
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 2.1e-08 63.9 180 36.1
Sabra07G0011500 Salix brachista HOM05D001085 ORTHO05D000895 6.2e-08 62.4 38 86.8
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 1.4e-07 61.2 114 41.2
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 1.4e-07 61.2 114 41.2
Os07g0474300 Oryza sativa ssp. japonica HOM05D033341 ORTHO05D036979 3.1e-07 60.1 253 33.6
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 1.5e-06 57.8 98 45.9
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 1.5e-06 57.8 98 45.9
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 2.6e-06 57.0 102 41.2


User provided reference genes

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