Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 7.4e-101 370.5 188 100.0
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 5.0e-89 331.3 188 89.9
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 7.9e-87 323.9 188 87.2
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.4e-75 286.6 190 76.3
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 2.9e-73 278.9 188 73.4
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 8.5e-73 277.3 188 73.4
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.5e-72 276.6 178 74.7
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 3.2e-72 275.4 183 74.3
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 8.0e-71 270.8 182 74.2
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 8.0e-71 270.8 184 73.4
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 8.8e-70 267.3 186 68.8
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 8.8e-70 267.3 188 71.8
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 8.8e-70 267.3 176 75.0
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.0e-69 266.2 186 69.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 4.4e-69 265.0 188 72.3
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 4.4e-69 265.0 195 69.7
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 4.4e-69 265.0 195 69.7
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 5.7e-69 264.6 187 69.5
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 7.5e-69 264.2 188 71.8
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 7.5e-69 264.2 186 68.3
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 9.8e-69 263.8 180 72.2
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 1.7e-68 263.1 192 72.4
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 2.2e-68 262.7 180 71.7
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 2.8e-68 262.3 181 74.0
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 6.3e-68 261.2 180 72.8
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 6.3e-68 261.2 182 74.7
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.4e-67 260.0 179 70.4
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 1.4e-67 260.0 189 70.4
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 2.4e-67 259.2 179 72.1
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 2.4e-67 259.2 178 69.7
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 4.1e-67 258.5 173 73.4
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 2.7e-66 255.8 184 70.7
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 4.5e-66 255.0 178 68.0
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.0e-65 253.8 182 71.4
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.0e-65 253.8 183 69.9
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.3e-65 253.4 182 71.4
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 1.7e-65 253.1 182 72.0
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 1.7e-65 253.1 183 68.9
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 5.0e-65 251.5 186 65.1
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.1e-64 250.4 177 70.1
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.1e-64 250.4 175 71.4
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 1.9e-64 249.6 180 67.8
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 2.5e-64 249.2 175 70.3
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 2.5e-64 249.2 182 71.4
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 4.2e-64 248.4 168 72.6
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 7.2e-64 247.7 173 67.1
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 9.5e-64 247.3 179 67.6
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 9.5e-64 247.3 166 72.3
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 1.2e-63 246.9 175 70.9
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 1.6e-63 246.5 183 67.8
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 2.8e-63 245.7 178 69.1
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 3.6e-63 245.4 188 67.6
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 6.1e-63 244.6 166 71.1
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 6.1e-63 244.6 180 67.2
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 8.0e-63 244.2 188 67.6
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 8.0e-63 244.2 183 66.1
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 4.0e-62 241.9 192 65.1
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 4.4e-61 238.4 168 67.3
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 5.7e-61 238.0 183 71.0
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 5.7e-61 238.0 183 71.0
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 7.5e-61 237.7 171 68.4
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.3e-60 236.9 183 65.0
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.7e-60 236.5 178 65.7
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.7e-60 236.5 171 67.8
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 4.9e-60 235.0 178 65.2
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 6.3e-60 234.6 178 64.6
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 1.4e-59 233.4 167 68.3
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 1.4e-59 233.4 184 63.6
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.0e-58 229.6 168 67.9
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 2.0e-58 229.6 165 68.5
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 3.5e-58 228.8 168 66.1
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 3.5e-58 228.8 168 66.1
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 5.9e-58 228.0 175 63.4
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 7.8e-58 227.6 168 65.5
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 7.8e-58 227.6 168 65.5
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 7.8e-58 227.6 172 63.4
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.0e-57 227.3 168 65.5
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.3e-57 226.9 179 63.7
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 2.3e-57 226.1 255 49.8
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 2.9e-57 225.7 179 62.6
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 3.8e-57 225.3 183 61.2
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 8.6e-57 224.2 191 59.7
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.3e-56 222.2 144 76.4
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 4.0e-54 215.3 167 63.5
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 4.0e-54 215.3 154 70.1
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.3e-52 210.3 136 75.0
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 2.2e-52 209.5 136 75.0
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 4.9e-52 208.4 174 59.2
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 1.8e-51 206.5 136 74.3
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 2.4e-51 206.1 131 74.0
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 2.7e-50 202.6 138 71.0
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 1.0e-49 200.7 175 58.3
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.4e-43 180.3 187 53.5
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 3.9e-41 172.2 183 48.1
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.2e-39 167.2 176 52.8
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 6.2e-39 164.9 134 61.2
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 1.1e-38 164.1 164 54.9
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 4.4e-37 158.7 164 50.6
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 5.8e-37 158.3 101 77.2
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 3.2e-35 152.5 197 45.7
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 4.0e-30 135.6 84 71.4
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 5.8e-29 131.7 74 89.2
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 1.1e-27 127.5 131 51.9
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 9.2e-27 124.4 171 43.9
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.6e-26 123.6 170 41.8
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.0e-25 119.4 87 70.1
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 5.2e-22 108.6 164 36.6
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 4.4e-21 105.5 74 66.2
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 1.3e-17 94.0 138 39.9
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 9.0e-14 81.3 61 59.0
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 6.0e-10 68.6 67 55.2
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 1.5e-08 63.9 40 75.0
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 3.3e-08 62.8 40 67.5


User provided reference genes

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