Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 0.0e+00 1226.5 755 100.0
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 1.8e-299 1032.3 759 87.2
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.1e-176 624.4 765 52.8
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 1.1e-171 607.8 773 55.4
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 3.2e-171 606.3 693 55.8
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 1.4e-169 600.9 750 57.5
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 3.9e-169 599.4 803 52.2
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 1.8e-166 590.5 863 51.1
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 4.2e-163 579.3 761 54.7
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 1.0e-156 558.1 601 60.2
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 2.2e-156 557.0 805 52.9
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 5.0e-156 555.8 758 54.6
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 9.4e-155 551.6 781 54.7
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 4.7e-154 549.3 784 52.0
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 2.0e-152 543.9 778 53.9
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 3.3e-152 543.1 783 54.0
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.4e-152 542.7 762 49.0
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.4e-150 537.0 544 57.2
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 2.7e-149 533.5 819 45.1
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 1.7e-148 530.8 750 53.2
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 6.8e-145 518.8 766 52.3
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 8.8e-145 518.5 772 50.6
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 1.3e-143 514.6 756 46.3
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.3e-143 514.6 767 52.0
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 1.7e-143 514.2 758 45.9
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 5.4e-142 509.2 541 61.0
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 5.4e-142 509.2 817 43.2
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.2e-141 508.1 768 44.5
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 2.7e-141 506.9 806 44.4
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.5e-141 506.5 745 49.9
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 5.9e-141 505.8 822 47.3
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.3e-140 504.6 836 46.7
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 6.1e-138 495.7 756 48.7
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 4.0e-137 493.0 541 54.7
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 5.2e-137 492.7 811 48.3
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 2.8e-135 486.9 811 44.9
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 3.7e-135 486.5 689 46.4
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 1.8e-134 484.2 824 43.9
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 1.2e-133 481.5 829 45.1
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 2.7e-133 480.3 839 42.0
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 3.5e-133 479.9 816 42.5
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 3.5e-133 479.9 766 48.8
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 7.8e-133 478.8 764 44.4
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 5.6e-131 472.6 748 43.3
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 2.6e-128 463.8 815 41.2
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 5.7e-128 462.6 740 42.8
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 4.9e-127 459.5 820 41.3
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 3.2e-126 456.8 765 46.7
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 4.1e-126 456.4 751 44.2
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 3.0e-124 450.3 748 48.4
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 6.6e-124 449.1 537 51.4
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 3.4e-120 436.8 760 42.2
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 4.4e-120 436.4 757 42.0
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 9.8e-120 435.3 766 47.8
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 8.3e-119 432.2 764 42.3
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 3.5e-117 426.8 454 59.7
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 4.6e-117 426.4 611 47.5
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 1.7e-116 424.5 779 41.3
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 1.9e-115 421.0 802 39.9
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 7.3e-115 419.1 785 40.3
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 1.2e-114 418.3 751 43.1
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 2.1e-114 417.5 543 53.0
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 1.4e-113 414.8 570 45.3
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 3.1e-113 413.7 567 48.9
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 5.8e-112 409.5 773 41.9
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 1.3e-111 408.3 758 41.0
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 8.3e-111 405.6 752 42.4
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.1e-110 405.2 751 41.3
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 2.7e-109 400.6 778 39.1
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 2.7e-109 400.6 778 39.1
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 7.3e-107 392.5 492 47.6
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 2.8e-106 390.6 759 39.3
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 2.4e-105 387.5 477 49.7
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 3.6e-98 363.6 404 54.5
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 3.4e-96 357.1 424 51.7
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 9.3e-94 349.0 588 41.3
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 4.3e-91 340.1 794 41.9
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.3e-84 318.5 513 42.3
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 2.4e-78 297.7 443 44.0
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 2.4e-73 281.2 618 36.1
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 5.8e-72 276.6 539 36.9
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 4.9e-71 273.5 770 35.2
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 1.1e-70 272.3 769 35.4
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 8.7e-68 262.7 389 47.3
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 1.1e-65 255.8 265 61.1
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 1.3e-63 248.8 510 40.8
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 2.9e-55 221.1 550 34.2
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 1.4e-54 218.8 511 39.5
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 6.7e-52 209.9 311 47.3
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 5.9e-40 170.2 548 27.2
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 6.5e-31 140.2 183 49.2
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.1e-25 120.9 326 35.9
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 2.5e-22 111.7 412 31.3
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.1e-21 108.6 122 50.8
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 8.3e-18 96.7 113 53.1
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.1e-17 94.7 192 42.7
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 3.8e-15 87.8 137 40.9
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 4.7e-13 80.9 70 60.0
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 4.7e-13 80.9 81 54.3
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.3e-12 78.6 68 63.2
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 5.2e-12 77.4 81 51.9
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 8.9e-12 76.6 81 51.9
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.4e-11 74.7 87 49.4
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 4.1e-09 67.8 129 39.5


User provided reference genes

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