Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 3.7e-246 854.7 544 100.0
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.0e-166 590.9 548 79.6
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 1.9e-133 480.3 465 60.4
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 6.0e-127 458.8 416 63.0
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 5.1e-126 455.7 454 60.4
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 2.5e-125 453.4 450 61.1
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.2e-124 451.1 418 60.8
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 2.1e-124 450.3 389 64.3
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 2.8e-124 449.9 418 60.5
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 1.1e-123 448.0 389 64.0
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 3.1e-123 446.4 459 59.0
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 3.1e-123 446.4 389 63.8
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 2.6e-122 443.4 465 54.8
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 5.8e-122 442.2 396 61.4
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 9.9e-122 441.4 389 62.0
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 2.9e-121 439.9 421 62.7
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 2.9e-121 439.9 386 63.2
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 2.9e-121 439.9 393 61.8
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 3.8e-121 439.5 389 60.9
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 3.8e-121 439.5 389 60.9
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 3.8e-121 439.5 392 61.0
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 3.2e-120 436.4 388 62.9
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 5.4e-120 435.6 388 61.6
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 7.1e-120 435.3 391 61.6
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 9.3e-120 434.9 389 61.4
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 1.2e-119 434.5 392 60.7
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 2.1e-119 433.7 383 62.4
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 3.5e-119 433.0 390 61.3
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 4.6e-119 432.6 385 62.3
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 6.0e-119 432.2 456 55.5
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 3.0e-118 429.9 384 62.0
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 3.0e-118 429.9 390 60.8
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 1.5e-117 427.6 445 59.3
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 2.5e-117 426.8 386 61.9
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 9.6e-117 424.9 389 59.6
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 9.6e-117 424.9 391 61.1
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 9.6e-117 424.9 383 61.1
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 1.6e-116 424.1 385 61.8
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 2.1e-116 423.7 450 60.9
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 6.2e-116 422.2 384 59.9
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 6.2e-116 422.2 387 61.0
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 6.2e-116 422.2 382 60.2
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 1.4e-115 421.0 392 59.4
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 1.8e-115 420.6 383 60.3
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 3.1e-115 419.9 386 59.6
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 4.0e-115 419.5 379 60.9
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 5.3e-115 419.1 384 60.2
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 5.3e-115 419.1 384 60.4
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 5.3e-115 419.1 382 60.5
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.5e-114 417.5 388 59.5
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 1.5e-114 417.5 382 60.7
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 2.0e-114 417.2 449 61.7
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 4.4e-114 416.0 388 59.5
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 5.8e-114 415.6 386 60.9
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 5.8e-114 415.6 384 58.9
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 7.6e-114 415.2 456 59.4
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 1.3e-113 414.5 376 60.4
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 1.7e-113 414.1 382 60.7
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 1.7e-113 414.1 379 60.7
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 2.9e-113 413.3 409 58.7
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 6.4e-113 412.1 631 45.3
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 1.9e-112 410.6 385 59.0
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 2.4e-112 410.2 385 59.2
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 3.5e-111 406.4 380 58.4
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 6.0e-111 405.6 390 58.7
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 7.8e-111 405.2 380 58.7
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 2.5e-109 400.2 390 57.7
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.5e-109 400.2 479 56.8
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 2.5e-109 400.2 354 61.3
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 3.3e-109 399.8 390 58.7
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 3.3e-109 399.8 390 58.7
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 3.3e-109 399.8 388 58.8
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 3.3e-109 399.8 390 58.7
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 3.3e-109 399.8 390 57.4
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 3.3e-109 399.8 384 58.1
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 4.3e-109 399.4 391 57.5
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 9.6e-109 398.3 388 57.2
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.6e-108 397.5 392 57.9
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.1e-108 397.1 468 55.8
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 3.6e-108 396.4 409 54.5
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 3.6e-108 396.4 372 59.7
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 1.1e-107 394.8 393 56.2
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 8.4e-105 385.2 388 57.2
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 1.9e-104 384.0 388 55.4
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 2.7e-103 380.2 382 56.8
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 7.4e-101 372.1 391 56.3
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.4e-99 367.9 388 53.1
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 6.2e-92 342.4 360 52.8
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.3e-89 334.7 371 51.2
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 1.4e-88 331.3 351 53.0
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 6.7e-86 322.4 337 56.4
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 8.7e-86 322.0 319 57.1
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 3.2e-80 303.5 351 53.0
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 3.9e-78 296.6 287 57.5
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 1.1e-72 278.5 282 55.7
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 1.9e-72 277.7 353 45.3
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 3.6e-71 273.5 286 54.2
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.2e-58 231.9 376 41.2
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.6e-58 230.7 189 65.1
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 6.1e-55 219.5 124 79.8
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.5e-53 214.9 243 52.3
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 3.7e-36 157.1 233 42.9
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 4.9e-36 156.8 207 45.4
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.1e-32 145.6 357 32.2
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 2.9e-28 131.0 69 85.5
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 1.4e-27 128.6 98 72.4
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 2.4e-27 127.9 213 41.8
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 5.4e-27 126.7 74 83.8
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 1.6e-26 125.2 74 83.8
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 1.9e-24 118.2 76 78.9
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 2.3e-22 111.3 115 63.5
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.3e-20 105.5 55 83.6
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.7e-20 105.1 131 68.7
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 4.9e-20 103.6 61 80.3
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 8.3e-20 102.8 131 67.9
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 4.6e-18 97.1 131 67.9
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 2.8e-15 87.8 67 70.1
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 3.1e-14 84.3 48 79.2
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 3.1e-14 84.3 48 79.2
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 5.8e-13 80.1 39 94.9
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 3.7e-12 77.4 38 86.8
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 4.9e-12 77.0 103 37.9


User provided reference genes

Program Settings