Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 2.9e-202 708.4 367 100.0
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 2.1e-131 473.0 274 88.7
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 1.2e-99 367.5 327 59.0
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 4.6e-99 365.5 363 56.7
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 3.3e-97 359.4 364 54.4
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 7.4e-97 358.2 372 54.0
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 4.8e-96 355.5 345 57.1
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 1.3e-93 347.4 352 55.4
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.7e-93 347.1 361 52.9
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 5.0e-93 345.5 325 57.8
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 1.9e-92 343.6 374 49.5
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 2.5e-92 343.2 359 53.2
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 2.5e-92 343.2 322 56.2
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 3.2e-92 342.8 322 56.2
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 1.6e-91 340.5 362 54.4
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 6.1e-91 338.6 322 55.0
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 1.0e-90 337.8 363 51.8
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 5.2e-90 335.5 344 53.8
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 6.7e-90 335.1 367 50.4
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 6.3e-88 328.6 359 51.0
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 6.3e-88 328.6 361 51.2
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.4e-87 327.4 361 51.5
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 1.8e-87 327.0 363 52.3
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.1e-87 326.2 361 51.0
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.6e-86 323.2 359 50.7
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.0e-85 321.2 368 48.4
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 6.5e-85 318.5 362 52.5
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 9.4e-84 314.7 352 50.9
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 2.7e-83 313.2 361 50.4
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 4.7e-83 312.4 315 55.2
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 8.0e-83 311.6 373 49.6
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 8.2e-80 301.6 374 47.9
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 1.1e-79 301.2 362 47.2
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 1.2e-78 297.7 360 48.3
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 1.6e-78 297.4 361 48.8
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 2.9e-77 293.1 362 46.1
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 5.0e-77 292.4 358 47.2
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 1.5e-73 280.8 360 44.7
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 4.4e-73 279.3 368 45.1
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 9.8e-73 278.1 280 54.3
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 1.3e-72 277.7 364 43.4
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 1.6e-70 270.8 362 45.6
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 5.9e-70 268.9 352 45.2
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 7.7e-70 268.5 353 45.0
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 2.3e-69 266.9 364 44.0
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 3.8e-69 266.2 381 44.6
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.1e-68 264.6 363 44.1
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 5.5e-68 262.3 377 43.8
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 9.5e-68 261.5 354 44.6
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 4.7e-67 259.2 355 44.8
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 2.0e-65 253.8 351 43.6
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 6.3e-64 248.8 342 43.6
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.8e-63 247.3 326 45.4
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 1.8e-63 247.3 322 46.9
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 2.4e-63 246.9 332 45.8
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 3.1e-63 246.5 351 44.7
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 1.6e-62 244.2 341 43.7
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 3.5e-62 243.0 365 40.8
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.7e-61 240.7 274 52.2
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 2.9e-61 240.0 273 51.6
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.1e-60 238.0 348 43.4
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 5.6e-60 235.7 339 43.4
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 7.3e-60 235.3 331 43.5
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 8.0e-59 231.9 321 44.9
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 4.0e-58 229.6 347 42.9
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 2.6e-57 226.9 302 46.0
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 4.9e-56 222.6 271 48.0
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 4.9e-56 222.6 331 39.0
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 6.4e-56 222.2 210 59.5
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 1.1e-55 221.5 354 41.5
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 3.2e-55 219.9 369 41.2
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.6e-54 217.6 217 57.1
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 6.0e-54 215.7 345 39.7
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 7.8e-54 215.3 298 45.6
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 7.8e-54 215.3 205 60.0
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 8.6e-53 211.8 347 43.5
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 1.1e-52 211.5 297 43.8
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 2.3e-50 203.8 280 43.9
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 5.2e-50 202.6 361 40.2
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 5.2e-50 202.6 361 40.2
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 3.7e-48 196.4 281 42.7
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.6e-46 191.0 255 45.5
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 6.6e-45 185.7 387 34.9
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 8.6e-45 185.3 295 39.7
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 6.4e-40 169.1 340 34.7
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 6.2e-35 152.5 345 33.9
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 6.2e-35 152.5 120 64.2
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 6.2e-35 152.5 372 31.7
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 1.1e-34 151.8 363 31.1
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 1.4e-34 151.4 359 33.1
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 2.4e-34 150.6 355 33.2
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 2.4e-34 150.6 345 33.9
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 4.4e-33 146.4 359 32.6
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 7.6e-33 145.6 349 33.0
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 7.6e-33 145.6 349 33.0
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 7.6e-33 145.6 362 30.7
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 1.7e-32 144.4 349 32.7
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 3.9e-29 133.3 374 30.2
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 6.6e-29 132.5 289 34.3
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 6.6e-29 132.5 355 32.1
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 2.5e-28 130.6 355 31.8
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 4.4e-25 119.8 297 31.6
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 7.6e-25 119.0 143 47.6
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 1.7e-24 117.9 298 29.5
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 4.2e-23 113.2 370 28.1
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 5.4e-23 112.8 297 31.0
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 5.4e-23 112.8 291 29.6
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 7.1e-23 112.5 238 33.2
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 3.3e-20 103.6 289 29.4
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.4e-18 98.2 164 38.4
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 1.7e-16 91.3 320 24.1
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.7e-14 84.0 114 41.2
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.7e-14 84.0 114 41.2
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 8.1e-11 72.4 141 33.3


User provided reference genes

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