Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 6.4e-241 837.0 434 100.0
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 2.9e-193 678.7 434 83.9
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 5.1e-161 571.6 433 70.4
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 1.4e-158 563.5 434 69.8
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 3.4e-157 558.9 434 68.7
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 3.4e-157 558.9 434 68.4
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 5.8e-157 558.1 434 69.4
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.3e-156 557.0 434 69.1
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 8.3e-156 554.3 438 69.4
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.4e-155 553.5 435 68.7
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 3.5e-154 548.9 434 67.7
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 3.9e-153 545.4 435 67.8
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 6.6e-153 544.7 434 68.2
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 1.1e-152 543.9 434 67.7
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.5e-152 543.5 432 67.8
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.9e-152 543.1 462 65.2
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 2.5e-152 542.7 440 67.0
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 5.6e-152 541.6 438 67.6
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 7.3e-152 541.2 434 67.5
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.2e-151 540.4 436 67.7
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 1.2e-151 540.4 434 67.1
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 2.8e-151 539.3 435 67.6
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 4.7e-151 538.5 435 66.4
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 3.1e-150 535.8 438 66.2
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 8.9e-150 534.3 434 65.9
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 1.2e-149 533.9 435 65.3
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 4.4e-149 531.9 463 63.9
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 7.6e-149 531.2 435 65.1
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 2.9e-148 529.3 435 64.6
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 3.8e-148 528.9 435 65.3
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 8.4e-148 527.7 434 65.7
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 1.4e-147 526.9 434 64.3
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 5.4e-147 525.0 435 65.5
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 5.4e-147 525.0 434 64.7
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 3.5e-146 522.3 434 64.3
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 4.6e-146 521.9 434 64.7
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 4.6e-146 521.9 434 65.0
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.0e-145 520.8 434 63.8
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.3e-145 520.4 435 64.4
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 1.3e-145 520.4 438 65.1
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 2.3e-145 519.6 433 65.4
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 3.0e-145 519.2 432 64.4
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 6.6e-145 518.1 444 65.3
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 6.6e-145 518.1 435 64.6
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 8.7e-145 517.7 434 63.4
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.1e-144 517.3 434 64.5
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.5e-144 516.2 432 65.5
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 5.6e-144 515.0 417 67.1
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 7.3e-144 514.6 464 61.0
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 7.3e-144 514.6 458 61.6
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 1.3e-143 513.8 435 65.1
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 4.8e-143 511.9 434 62.7
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 6.2e-143 511.5 444 62.6
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.8e-142 510.0 434 63.6
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 2.4e-142 509.6 434 62.4
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 2.4e-142 509.6 434 62.4
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.2e-141 507.3 434 63.1
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.5e-141 506.9 434 63.1
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 2.0e-141 506.5 434 62.4
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 5.8e-141 505.0 435 61.6
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 9.9e-141 504.2 428 63.8
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 1.3e-140 503.8 435 63.2
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.1e-139 500.7 434 62.7
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.5e-138 495.7 434 62.4
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 4.6e-138 495.4 439 62.4
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 7.8e-138 494.6 411 65.2
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.7e-137 493.4 434 62.2
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.5e-136 490.3 434 60.6
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.5e-136 490.3 434 61.8
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 4.3e-136 488.8 434 61.3
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 7.3e-136 488.0 434 61.3
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 1.3e-135 487.3 459 59.0
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 2.1e-135 486.5 432 61.1
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 6.2e-135 485.0 434 61.5
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 8.1e-135 484.6 434 61.5
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 6.9e-134 481.5 430 60.9
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 1.2e-133 480.7 434 61.1
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.0e-133 479.9 465 58.7
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 2.6e-133 479.6 435 61.8
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 1.3e-132 477.2 435 61.6
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 1.3e-132 477.2 435 61.6
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 8.4e-132 474.6 435 60.2
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 1.4e-131 473.8 435 60.9
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 1.4e-131 473.8 435 60.9
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 1.9e-131 473.4 435 59.3
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 2.7e-130 469.5 443 58.9
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-129 467.2 434 59.2
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 1.9e-128 463.4 437 56.5
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 3.3e-128 462.6 452 57.3
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 7.4e-128 461.5 437 56.8
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 1.3e-127 460.7 443 58.2
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.9e-124 449.5 434 58.5
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 8.4e-124 448.0 377 63.9
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 7.1e-123 444.9 434 55.8
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 7.1e-123 444.9 514 49.2
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 2.7e-122 443.0 386 61.1
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 8.7e-121 438.0 276 81.9
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 5.3e-118 428.7 439 55.6
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 6.9e-118 428.3 437 54.9
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 5.8e-117 425.2 437 53.3
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 3.2e-115 419.5 437 53.5
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.5e-109 400.6 276 76.1
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 4.6e-106 389.0 465 50.8
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 2.6e-101 373.2 442 48.6
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 7.2e-99 365.2 445 50.1
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 9.1e-78 295.0 245 63.7
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 6.3e-63 245.7 476 36.8
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.3e-59 232.3 158 74.1
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.8e-58 230.3 158 74.1
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.8e-57 227.6 158 73.4
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 4.6e-53 213.0 480 33.3
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 5.2e-49 199.5 149 69.8
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.7e-45 187.2 158 63.3
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 1.5e-43 181.4 396 35.6
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.6e-42 177.9 114 76.3
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.1e-41 175.3 144 60.4
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.2e-39 167.5 116 72.4
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 4.7e-34 149.8 102 67.6
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.4e-33 148.3 109 72.5
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 1.1e-25 122.1 103 56.3
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 2.0e-24 117.9 85 70.6
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.7e-23 114.8 95 62.1
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 6.2e-10 69.7 39 87.2
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 1.4e-09 68.6 39 84.6
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 6.9e-09 66.2 123 35.8
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 4.5e-08 63.5 116 39.7


User provided reference genes

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