Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 5.7e-138 494.2 242 100.0
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 3.5e-135 485.0 242 97.9
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 3.0e-123 445.3 240 91.2
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 5.7e-122 441.0 239 90.0
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 1.1e-120 436.8 235 91.5
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 2.4e-120 435.6 233 91.8
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 1.2e-119 433.3 240 89.6
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 2.0e-119 432.6 244 89.3
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 4.5e-119 431.4 237 88.6
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 5.9e-119 431.0 238 88.7
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 7.8e-119 430.6 245 88.2
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 7.8e-119 430.6 238 88.2
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.0e-118 430.3 240 89.2
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.3e-118 429.9 240 88.8
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.3e-118 429.9 238 89.5
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 2.3e-118 429.1 239 90.4
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 3.9e-118 428.3 238 89.1
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 8.6e-118 427.2 237 89.5
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 3.3e-117 425.2 238 87.4
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 9.5e-117 423.7 235 88.5
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 1.6e-116 422.9 235 86.8
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 2.1e-116 422.5 239 89.1
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.8e-116 422.2 225 93.3
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 4.7e-116 421.4 238 86.6
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 6.1e-116 421.0 231 90.5
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 8.0e-116 420.6 226 91.2
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 1.4e-115 419.9 233 89.3
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.3e-115 419.1 239 88.3
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 2.3e-115 419.1 233 87.6
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 6.8e-115 417.5 240 86.2
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 1.5e-114 416.4 231 89.2
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 2.0e-114 416.0 240 86.7
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 2.9e-113 412.1 242 84.3
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 2.9e-113 412.1 232 89.7
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 3.7e-113 411.8 242 85.5
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 3.7e-113 411.8 233 87.6
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 6.4e-113 411.0 231 90.5
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 8.3e-113 410.6 246 85.8
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 1.1e-112 410.2 242 85.1
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.4e-112 409.8 242 85.1
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.9e-112 409.5 242 86.4
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 3.2e-112 408.7 242 86.8
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 3.2e-112 408.7 242 84.7
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 9.2e-112 407.1 238 85.3
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 1.7e-110 402.9 235 86.8
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 2.3e-110 402.5 250 82.8
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 2.3e-110 402.5 250 82.8
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 3.0e-110 402.1 235 85.1
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 3.0e-110 402.1 235 85.1
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.9e-110 401.7 235 86.4
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 5.6e-109 397.9 224 91.1
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 3.6e-108 395.2 244 82.4
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 4.7e-108 394.8 232 83.6
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 8.0e-108 394.0 242 80.6
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 2.3e-107 392.5 228 84.6
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 3.1e-107 392.1 244 81.6
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 6.8e-107 391.0 226 86.3
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 2.0e-106 389.4 244 81.6
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 2.0e-106 389.4 249 81.9
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 2.6e-106 389.0 226 84.5
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 1.1e-104 383.6 235 80.4
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 5.4e-104 381.3 235 82.6
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.2e-103 380.2 235 82.6
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 5.6e-101 371.3 240 80.0
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 5.6e-101 371.3 240 80.0
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.4e-99 366.7 232 77.2
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 2.3e-99 365.9 233 78.5
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 2.3e-99 365.9 204 90.2
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 2.0e-98 362.8 252 75.4
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 2.4e-96 355.9 228 75.0
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 3.2e-96 355.5 233 75.1
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 3.2e-96 355.5 228 73.7
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 2.7e-95 352.4 234 75.6
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 7.8e-95 350.9 234 73.5
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 1.0e-94 350.5 233 73.8
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 6.6e-94 347.8 203 86.2
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 1.9e-93 346.3 249 73.1
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 4.3e-93 345.1 249 73.1
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.6e-92 343.2 235 76.6
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 2.1e-92 342.8 200 86.0
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 2.6e-90 335.9 230 73.9
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 7.1e-88 327.8 200 83.5
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 7.1e-88 327.8 179 88.3
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 6.6e-86 321.2 231 69.3
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.1e-77 293.9 225 71.1
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 2.1e-76 289.7 245 62.9
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 5.4e-72 275.0 244 60.2
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.6e-68 263.5 139 89.9
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 9.3e-64 247.7 141 90.1
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 9.6e-61 237.7 220 53.2
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 6.2e-60 235.0 165 73.9
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 1.5e-58 230.3 150 76.0
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 2.5e-56 223.0 242 53.3
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 9.3e-56 221.1 221 52.0
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 8.0e-31 138.3 82 80.5
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.2e-25 120.2 223 31.8
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 6.3e-20 102.1 126 52.4
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.1e-11 74.7 105 42.9


User provided reference genes

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