Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 1.3e-276 955.7 468 100.0
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 7.1e-262 906.7 470 94.9
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 1.4e-228 796.2 464 82.8
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 6.3e-226 787.3 463 81.6
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 2.5e-222 775.4 470 78.9
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.0e-220 770.0 464 78.4
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 4.0e-220 768.1 470 77.4
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 5.2e-220 767.7 478 77.6
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 5.7e-219 764.2 468 78.6
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 3.7e-218 761.5 474 77.2
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 4.8e-218 761.1 483 76.2
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 6.3e-218 760.8 474 77.2
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.1e-217 760.0 468 77.8
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 4.1e-217 758.1 490 76.5
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 9.1e-217 756.9 473 77.6
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 9.1e-217 756.9 462 77.9
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 2.0e-216 755.7 462 77.7
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 7.7e-216 753.8 462 77.5
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 2.0e-211 739.2 463 76.2
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 2.6e-211 738.8 469 74.8
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 3.4e-211 738.4 462 75.3
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 4.4e-211 738.0 462 75.3
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.6e-208 729.6 463 75.8
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.0e-207 726.9 459 74.3
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 5.6e-206 721.1 460 75.2
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 2.8e-205 718.8 470 74.0
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.8e-204 716.1 456 74.6
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 1.8e-204 716.1 461 74.0
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.3e-202 709.9 431 77.5
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 2.9e-202 708.8 464 71.8
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 3.3e-198 695.3 463 72.6
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 3.3e-198 695.3 447 74.0
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 4.3e-198 694.9 469 71.6
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 1.2e-197 693.3 465 71.0
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 6.2e-197 691.0 460 71.3
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 6.2e-197 691.0 455 72.3
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 5.2e-196 688.0 457 72.6
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.2e-195 686.8 457 72.4
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 1.2e-195 686.8 455 72.1
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.5e-195 686.4 459 72.3
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 2.6e-195 685.6 456 71.5
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 4.4e-195 684.9 468 69.4
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 7.5e-195 684.1 464 70.7
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 1.3e-194 683.3 471 70.1
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.9e-194 682.2 464 69.8
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 4.9e-194 681.4 467 69.6
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 1.9e-193 679.5 455 71.2
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 3.2e-193 678.7 457 70.2
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 9.2e-193 677.2 468 68.6
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 9.2e-193 677.2 453 71.5
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 1.6e-192 676.4 456 70.8
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 2.1e-192 676.0 453 71.5
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 3.5e-192 675.2 467 70.0
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 3.9e-191 671.8 491 65.6
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 3.9e-191 671.8 469 69.9
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 5.1e-191 671.4 434 72.8
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 5.1e-191 671.4 469 70.6
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 5.1e-191 671.4 426 74.6
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 5.1e-191 671.4 366 85.8
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 6.6e-191 671.0 468 69.9
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 1.1e-190 670.2 469 70.4
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 1.1e-190 670.2 469 70.4
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.9e-190 669.5 454 71.8
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 2.5e-190 669.1 447 70.7
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 7.3e-190 667.5 436 73.4
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 1.4e-188 663.3 443 71.1
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 5.2e-188 661.4 440 70.7
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 3.4e-187 658.7 475 68.6
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 7.5e-187 657.5 427 73.8
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 2.2e-186 656.0 387 78.6
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 8.3e-186 654.1 460 67.4
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 1.4e-185 653.3 463 68.5
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 3.2e-185 652.1 500 65.8
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 4.1e-185 651.7 431 70.8
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 5.1e-183 644.8 364 80.8
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.1e-182 643.7 442 70.4
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 1.9e-182 642.9 466 69.1
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 2.5e-182 642.5 431 70.5
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 3.3e-182 642.1 442 69.9
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 1.4e-180 636.7 392 76.3
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.8e-180 636.3 385 77.1
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 3.1e-180 635.6 392 73.7
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 2.0e-179 632.9 396 76.8
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 2.3e-175 619.4 427 68.1
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 3.9e-175 618.6 479 65.6
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 2.2e-170 602.8 462 64.3
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 1.0e-167 594.0 430 67.0
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 2.3e-167 592.8 466 64.4
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 4.9e-162 575.1 334 81.4
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 1.6e-160 570.1 439 61.3
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 4.0e-156 555.4 436 60.3
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 3.4e-155 552.4 439 60.6
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 3.2e-153 545.8 456 59.2
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.0e-143 514.2 450 58.4
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 5.7e-142 508.4 388 61.6
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.8e-127 460.3 463 52.9
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.6e-115 420.6 324 65.4
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 2.0e-110 403.7 212 90.1
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.7e-104 383.3 267 70.8
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 9.1e-100 368.2 259 71.8
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 1.3e-98 364.4 219 81.7
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 8.6e-98 361.7 446 43.9
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.3e-93 347.8 383 45.7
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 7.8e-91 338.6 452 43.4
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 3.1e-79 300.1 321 51.4
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 8.1e-72 275.4 162 77.2
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 1.8e-71 274.2 260 54.2
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 4.0e-63 246.5 155 74.2
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 2.7e-59 233.8 249 53.4
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 8.4e-45 185.7 128 67.2
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 5.7e-33 146.4 133 58.6
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.0e-29 135.6 123 55.3
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.3e-26 125.2 81 75.3
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 5.1e-26 123.2 76 73.7
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 3.3e-25 120.6 67 80.6
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 7.2e-20 102.8 102 54.9
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 2.1e-19 101.3 135 37.8
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 2.3e-18 97.8 104 55.8
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 6.7e-18 96.3 130 43.8


User provided reference genes

Program Settings