Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-161 573.2 304 100.0
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 3.0e-43 179.9 95 89.5
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 3.9e-43 179.5 95 87.4
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 5.1e-43 179.1 95 87.4
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 7.6e-39 165.2 95 80.0
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-38 163.3 95 81.1
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.9e-37 160.6 93 77.4
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-30 136.7 93 74.2
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 9.1e-16 88.6 93 44.1
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 3.5e-15 86.7 86 47.7
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-13 79.7 90 40.0
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.4e-13 78.6 84 46.4
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.4e-13 78.6 84 46.4
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.4e-13 78.6 84 46.4
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-12 78.2 90 38.9
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 2.7e-12 77.0 83 47.0
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.0e-12 75.5 90 38.9
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.0e-12 75.5 86 41.9
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-11 74.7 95 41.1
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 3.0e-11 73.6 100 37.0
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.0e-11 73.6 90 38.9
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.7e-11 72.4 93 37.6
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 6.7e-11 72.4 86 40.7
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.8e-11 72.0 92 39.1
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.1e-10 71.6 98 42.9
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-10 71.6 86 41.9
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.5e-10 71.2 83 43.4
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-10 71.2 86 38.4
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-10 70.9 92 40.2
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-10 70.5 72 40.3
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.3e-10 70.1 107 41.1
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 3.3e-10 70.1 91 45.1
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 3.3e-10 70.1 91 39.6
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.4e-10 69.7 85 41.2
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.7e-10 69.3 93 41.9
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.7e-10 69.3 94 40.4
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.5e-10 68.9 88 40.9
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 7.5e-10 68.9 87 40.2
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 1.3e-09 68.2 100 34.0
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-09 68.2 88 37.5
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-09 68.2 92 38.0
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 2.2e-09 67.4 90 44.4
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 2.2e-09 67.4 91 44.0
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-09 67.4 92 38.0
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 2.2e-09 67.4 94 38.3
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 2.2e-09 67.4 92 39.1
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-09 67.4 83 43.4
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.8e-09 67.0 91 38.5
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.8e-09 67.0 91 38.5
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.8e-09 67.0 91 38.5
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-09 67.0 92 38.0
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.7e-09 66.6 103 38.8
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.7e-09 66.6 87 40.2
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.7e-09 66.6 88 38.6
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 4.8e-09 66.2 91 42.9
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 4.8e-09 66.2 97 36.1
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 6.3e-09 65.9 87 44.8
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.2e-09 65.5 84 39.3
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 8.2e-09 65.5 87 36.8
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-08 65.1 88 40.9
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-08 65.1 91 36.3
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.8e-08 64.3 98 39.8
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-08 64.3 84 39.3
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.4e-08 63.9 85 35.3
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-08 63.9 91 38.5
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-08 63.9 87 40.2
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.1e-08 63.5 90 35.6
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.1e-08 63.5 89 36.0
COL.COLO4_25715 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.1e-08 63.2 85 35.3
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.3e-08 62.8 86 38.4
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.0e-08 62.4 83 41.0
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.0e-08 62.4 90 34.4
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 7.0e-08 62.4 96 34.4
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.1e-08 62.0 84 38.1
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 9.1e-08 62.0 90 34.4
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 9.1e-08 62.0 88 34.1
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.2e-07 61.6 89 38.2
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-07 61.6 96 34.4
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 1.2e-07 61.6 92 35.9
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.6e-07 61.2 89 34.8
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 1.6e-07 61.2 90 36.7
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-07 61.2 88 34.1
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-07 61.2 90 37.8
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.0e-07 60.8 90 36.7
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.7e-07 60.5 83 38.6
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.7e-07 60.5 89 33.7
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 2.7e-07 60.5 96 33.3
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-07 60.1 89 37.1
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 3.5e-07 60.1 89 36.0
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 4.5e-07 59.7 88 39.8
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 4.5e-07 59.7 88 39.8
Lsat_1_v5_gn_1_78300 Lactuca sativa HOM05D000466 ORTHO05D000331 4.5e-07 59.7 98 34.7
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-07 59.7 86 38.4
Manes.07G021500 Manihot esculenta HOM05D002599 ORTHO05D001895 5.9e-07 59.3 92 39.1
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 5.9e-07 59.3 89 36.0
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 5.9e-07 59.3 89 36.0
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 5.9e-07 59.3 89 36.0
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 5.9e-07 59.3 89 36.0
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.7e-07 58.9 83 38.6
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.7e-07 58.9 84 35.7
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 7.7e-07 58.9 90 36.7
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 7.7e-07 58.9 93 36.6
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 7.7e-07 58.9 89 36.0
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 7.7e-07 58.9 89 36.0
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 7.7e-07 58.9 88 35.2
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 1.0e-06 58.5 121 36.4
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 1.0e-06 58.5 96 32.3
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-06 58.5 89 36.0
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-06 58.5 89 36.0
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.3e-06 58.2 93 34.4
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-06 58.2 90 34.4
Potri.004G219600 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-06 58.2 83 41.0
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-06 58.2 83 41.0
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-06 58.2 84 34.5
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-06 57.8 90 31.1
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-06 57.8 89 34.8
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-06 57.8 89 34.8
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-06 57.8 89 34.8
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-06 57.8 91 35.2
COL.COLO4_29532 Corchorus olitorius HOM05D002599 ORTHO05D025152 2.2e-06 57.4 142 29.6
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.2e-06 57.4 85 37.6
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-06 57.4 122 30.3
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-06 57.4 84 34.5
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.9e-06 57.0 86 34.9
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.9e-06 57.0 86 37.2
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 2.9e-06 57.0 71 39.4
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 2.9e-06 57.0 96 32.3
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 2.9e-06 57.0 84 36.9
Gohir.A04G130712 Gossypium hirsutum HOM05D019153 ORTHO05D001895 3.8e-06 56.6 91 31.9
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.8e-06 56.6 82 37.8
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.8e-06 56.6 84 38.1
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 3.8e-06 56.6 88 34.1
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.0e-06 56.2 84 38.1
Nitab4.5_0000676g0050 Nicotiana tabacum HOM05D000466 ORTHO05D000331 5.0e-06 56.2 89 39.3
Nitab4.5_0000850g0160 Nicotiana tabacum HOM05D000466 ORTHO05D000331 5.0e-06 56.2 89 39.3
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.0e-06 56.2 88 33.0
AT4G01500 Arabidopsis thaliana HOM05D000466 ORTHO05D000331 6.5e-06 55.8 104 35.6
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 6.5e-06 55.8 93 36.6
Atru.chr2.63 Acer truncatum HOM05D002599 ORTHO05D001895 8.5e-06 55.5 85 30.6
CARHR250180 Cardamine hirsuta HOM05D000466 ORTHO05D000331 8.5e-06 55.5 97 35.1
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.5e-06 55.5 99 33.3
Sabra07G0096700 Salix brachista HOM05D008886 ORTHO05D001895 8.5e-06 55.5 91 34.1
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 8.5e-06 55.5 84 35.7


User provided reference genes

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