Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 6.4e-85 317.4 161 100.0
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.4e-37 157.5 115 66.1
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.7e-35 152.5 111 65.8
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-34 149.8 112 66.1
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.7e-26 121.3 110 54.5
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-23 112.8 111 47.7
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-23 112.5 109 50.5
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-23 112.5 109 48.6
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 4.7e-19 98.6 110 45.5
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-18 96.7 111 42.3
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.3e-18 96.3 110 44.5
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-17 94.0 92 50.0
Manes.07G021500 Manihot esculenta HOM05D002599 ORTHO05D001895 5.9e-14 81.6 112 42.0
Manes.10G124912 Manihot esculenta HOM05D002599 ORTHO05D001895 7.7e-14 81.3 113 43.4
COL.COLO4_11750 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.3e-13 80.5 114 38.6
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-13 80.5 106 39.6
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-13 80.5 106 39.6
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-13 80.5 106 39.6
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.0e-13 78.6 126 41.3
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 8.5e-13 77.8 106 36.8
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-12 77.0 106 39.6
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-12 77.0 112 37.5
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.4e-12 77.0 109 43.1
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 1.9e-12 76.6 84 44.0
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.5e-12 76.3 109 43.1
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 4.2e-12 75.5 110 38.2
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 5.5e-12 75.1 112 37.5
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.4e-12 74.3 108 38.0
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-11 73.9 84 42.9
Gohir.D01G190550 Gossypium hirsutum HOM05D002599 ORTHO05D025152 1.6e-11 73.6 110 37.3
Gorai.002G234300 Gossypium raimondii HOM05D002599 ORTHO05D025152 1.6e-11 73.6 110 37.3
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.6e-11 73.6 108 34.3
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-11 73.6 104 37.5
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-11 73.6 106 38.7
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.1e-11 73.2 112 35.7
Manes.07G021600 Manihot esculenta HOM05D002599 ORTHO05D001895 2.1e-11 73.2 128 39.1
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 2.1e-11 73.2 108 35.2
Manes.07G021700 Manihot esculenta HOM05D002599 ORTHO05D001895 3.6e-11 72.4 116 40.5
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.6e-11 72.4 107 34.6
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-11 72.4 109 37.6
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 3.6e-11 72.4 86 40.7
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.7e-11 72.0 108 36.1
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 6.1e-11 71.6 104 34.6
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 6.1e-11 71.6 89 42.7
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.0e-11 71.2 112 34.8
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 8.0e-11 71.2 86 40.7
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 1.0e-10 70.9 102 36.3
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.8e-10 70.1 106 39.6
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-10 69.7 112 33.9
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-10 69.7 108 34.3
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 2.3e-10 69.7 106 34.9
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.0e-10 69.3 112 37.5
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 3.9e-10 68.9 112 36.6
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.9e-10 68.9 102 37.3
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.2e-10 68.6 111 33.3
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.2e-10 68.6 86 41.9
Gohir.D04G176033 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.7e-10 68.2 106 39.6
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.8e-10 67.8 97 41.2
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 8.8e-10 67.8 107 38.3
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 8.8e-10 67.8 112 39.3
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 8.8e-10 67.8 100 36.0
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 2.0e-09 66.6 116 33.6
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.0e-09 66.6 108 36.1
Manes.10G122700 Manihot esculenta HOM05D002599 ORTHO05D001895 2.0e-09 66.6 106 33.0
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.0e-09 66.6 113 32.7
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 2.0e-09 66.6 104 35.6
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 2.0e-09 66.6 111 33.3
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-09 66.6 112 37.5
Gohir.D04G176000 Gossypium hirsutum HOM05D019153 ORTHO05D047868 2.6e-09 66.2 106 36.8
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.6e-09 66.2 91 36.3
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 2.6e-09 66.2 87 37.9
Thecc.05G107200 Theobroma cacao HOM05D002599 ORTHO05D025152 3.3e-09 65.9 112 36.6
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.4e-09 65.5 108 35.2
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 4.4e-09 65.5 99 38.4
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.7e-09 65.1 100 40.0
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 7.4e-09 64.7 118 31.4
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.4e-09 64.7 106 31.1
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 7.4e-09 64.7 102 33.3
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.7e-09 64.3 107 35.5
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 9.7e-09 64.3 113 31.9
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.7e-09 64.3 111 32.4
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 9.7e-09 64.3 119 31.9
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 1.3e-08 63.9 87 35.6
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-08 63.9 111 34.2
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 1.3e-08 63.9 111 30.6
Potri.003G011250 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.7e-08 63.5 109 36.7
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 1.7e-08 63.5 109 33.0
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-08 63.5 110 32.7
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-08 63.2 109 37.6
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-08 62.8 92 38.0
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-08 62.8 111 33.3
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 2.8e-08 62.8 102 31.4
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.7e-08 62.4 107 35.5
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 3.7e-08 62.4 110 32.7
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.8e-08 62.0 117 33.3
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 6.3e-08 61.6 89 44.9
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.3e-08 61.6 111 33.3
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 6.3e-08 61.6 111 29.7
Gohir.D04G175900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.2e-08 61.2 114 33.3
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 8.2e-08 61.2 110 32.7
Gorai.012G167300 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.1e-07 60.8 114 33.3
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-07 60.8 91 36.3
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 1.1e-07 60.8 115 32.2
Atru.chr6.323 Acer truncatum HOM05D002599 ORTHO05D001895 1.4e-07 60.5 87 34.5
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.4e-07 60.5 112 31.2
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.4e-07 60.5 97 32.0
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-07 60.5 85 38.8
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-07 60.5 95 36.8
COL.COLO4_17754 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.4e-07 59.7 104 34.6
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.4e-07 59.7 107 34.6
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-07 59.7 88 40.9
Gohir.A04G130700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-07 59.3 109 32.1
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.1e-07 59.3 111 28.8
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 3.1e-07 59.3 118 33.1
Ah.12g052760 Amaranthus hybridus HOM05D002599 ORTHO05D001895 4.1e-07 58.9 115 31.3
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.1e-07 58.9 90 38.9
Potri.015G016700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.1e-07 58.9 109 32.1
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.1e-07 58.9 108 36.1
EL10Ac5g12341 Beta vulgaris HOM05D035930 ORTHO05D001895 5.3e-07 58.5 98 33.7
Gohir.A04G130712 Gossypium hirsutum HOM05D019153 ORTHO05D001895 5.3e-07 58.5 106 34.0
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.3e-07 58.5 107 31.8
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 5.3e-07 58.5 109 37.6
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 5.3e-07 58.5 115 34.8
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 5.3e-07 58.5 86 36.0
Gohir.D02G213400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.0e-07 58.2 86 36.0
Atru.chr3.613 Acer truncatum HOM05D002599 ORTHO05D001895 9.1e-07 57.8 114 30.7
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 9.1e-07 57.8 109 35.8
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 9.1e-07 57.8 100 33.0
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 9.1e-07 57.8 115 34.8
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 9.1e-07 57.8 115 34.8
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 9.1e-07 57.8 115 34.8
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.2e-06 57.4 118 29.7
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 1.6e-06 57.0 113 32.7
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 1.6e-06 57.0 113 32.7
Gohir.D02G213300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-06 57.0 86 34.9
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-06 56.6 113 31.0
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.0e-06 56.6 85 34.1
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.0e-06 56.6 107 30.8
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 4.5e-06 55.5 101 34.7
Thecc.04G013200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-06 55.5 95 36.8
EL10Ac5g12338 Beta vulgaris HOM05D035930 ORTHO05D001895 7.7e-06 54.7 104 32.7
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 7.7e-06 54.7 100 32.0
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 7.7e-06 54.7 114 32.5


User provided reference genes

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