Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0166700 Salix brachista HOM05D016764 ORTHO05D001895 3.2e-56 221.5 109 100.0
Sabra01G0164300 Salix brachista HOM05D016764 ORTHO05D001895 4.2e-48 194.5 105 90.5
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-39 166.0 105 77.1
Potri.004G219600 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-39 164.9 105 77.1
Potri.003G011000 Populus trichocarpa HOM05D016764 ORTHO05D001895 1.0e-30 136.7 104 65.4
Potri.003G010800 Populus trichocarpa HOM05D016764 ORTHO05D001895 4.0e-30 134.8 104 64.4
Potri.004G220000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-26 122.9 106 56.6
Sabra03G0006300 Salix brachista HOM05D016764 ORTHO05D001895 2.8e-23 112.1 102 56.9
Sabra03G0006200 Salix brachista HOM05D016764 ORTHO05D001895 5.2e-22 107.8 90 61.1
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.2e-13 80.1 105 41.9
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 2.6e-13 79.0 105 41.9
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 2.6e-13 79.0 98 42.9
Potri.003G025350 Populus trichocarpa HOM05D016764 ORTHO05D001895 3.5e-10 68.6 64 53.1
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.8e-10 67.4 105 36.2
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.7e-09 66.2 102 37.3
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.0e-09 65.5 102 37.3
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 3.9e-09 65.1 97 39.2
Manes.07G021750 Manihot esculenta HOM05D016764 ORTHO05D001895 5.0e-09 64.7 62 50.0
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.6e-09 63.9 105 33.3
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.6e-09 63.9 106 37.7
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.6e-09 63.9 105 34.3
Duzib052G0486 Durio zibethinus HOM05D002599 ORTHO05D001895 1.1e-08 63.5 111 32.4
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-08 63.5 100 33.0
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-08 63.2 105 33.3
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.9e-08 62.8 105 32.4
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.9e-08 62.8 102 36.3
Potri.003G015900 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-08 62.8 104 35.6
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.9e-08 62.8 107 32.7
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.5e-08 62.4 105 35.2
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 2.5e-08 62.4 105 33.3
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 5.6e-08 61.2 85 35.3
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 9.5e-08 60.5 100 35.0
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 9.5e-08 60.5 105 33.3
Potri.004G218101 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-07 60.1 104 34.6
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-07 60.1 106 31.1
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-07 60.1 106 31.1
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-07 60.1 85 35.3
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-07 59.7 100 31.0
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.1e-07 59.3 111 33.3
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.1e-07 59.3 102 33.3
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.1e-07 59.3 99 32.3
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-07 58.9 106 31.1
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 2.8e-07 58.9 104 37.5
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-07 58.5 106 32.1
Gohir.D12G026700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.7e-07 58.2 110 31.8
Sabra01G0165000 Salix brachista HOM05D002599 ORTHO05D001895 6.2e-07 57.8 101 30.7
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.0e-07 57.4 92 38.0
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 8.0e-07 57.4 105 33.3
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 8.0e-07 57.4 105 33.3
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 8.0e-07 57.4 105 33.3
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 8.0e-07 57.4 91 33.0
Gohir.A12G027200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-06 57.0 107 30.8
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.1e-06 57.0 101 33.7
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-06 57.0 105 33.3
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 1.1e-06 57.0 100 31.0
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 1.1e-06 57.0 104 32.7
Gorai.008G027000 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.4e-06 56.6 94 34.0
Potri.003G017566 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-06 56.2 104 34.6
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-06 56.2 94 35.1
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-06 55.8 84 35.7
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-06 55.8 97 34.0
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 2.3e-06 55.8 83 34.9
Atru.chr6.704 Acer truncatum HOM05D002599 ORTHO05D001895 3.1e-06 55.5 84 36.9
Gohir.D04G176484 Gossypium hirsutum HOM05D002599 ORTHO05D029872 3.1e-06 55.5 110 32.7
Gohir.D12G026733 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-06 55.5 111 31.5
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-06 55.5 106 32.1
COL.COLO4_17588 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.0e-06 55.1 93 34.4
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.0e-06 55.1 91 35.2
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 4.0e-06 55.1 107 30.8
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.2e-06 54.7 106 35.8
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.2e-06 54.7 84 39.3
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 5.2e-06 54.7 107 30.8
Gohir.A12G027266 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.8e-06 54.3 107 31.8
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.8e-06 54.3 107 31.8
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.9e-06 53.9 83 37.3
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.9e-06 53.9 105 32.4
Potri.015G016700 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.9e-06 53.9 106 31.1


User provided reference genes

Program Settings