Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0164300 Salix brachista HOM05D016764 ORTHO05D001895 2.8e-73 278.5 138 100.0
Sabra01G0166700 Salix brachista HOM05D016764 ORTHO05D001895 5.3e-48 194.5 105 90.5
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-41 173.3 110 73.6
Potri.004G219600 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-41 172.2 110 73.6
Potri.003G011000 Populus trichocarpa HOM05D016764 ORTHO05D001895 5.0e-30 134.8 104 62.5
Potri.003G010800 Populus trichocarpa HOM05D016764 ORTHO05D001895 1.9e-29 132.9 104 61.5
Potri.004G220000 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.7e-25 118.6 107 54.2
Sabra03G0006300 Salix brachista HOM05D016764 ORTHO05D001895 2.3e-22 109.4 102 53.9
Sabra03G0006200 Salix brachista HOM05D016764 ORTHO05D001895 7.3e-21 104.4 90 57.8
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 9.5e-13 77.4 98 42.9
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.2e-12 77.0 105 41.0
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 2.8e-12 75.9 105 41.0
Potri.003G025350 Populus trichocarpa HOM05D016764 ORTHO05D001895 2.6e-10 69.3 64 50.0
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.4e-10 68.6 91 40.7
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.4e-10 68.6 100 37.0
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 5.8e-10 68.2 99 35.4
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.8e-10 67.4 105 35.2
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 9.8e-10 67.4 105 37.1
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-09 66.6 105 34.3
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-09 66.6 105 38.1
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.7e-09 65.5 105 32.4
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.7e-09 65.5 106 35.8
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.7e-09 65.5 105 36.2
Potri.003G015900 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.9e-09 65.1 105 36.2
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.9e-09 65.1 105 34.3
Duzib052G0486 Durio zibethinus HOM05D002599 ORTHO05D001895 6.4e-09 64.7 108 35.2
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.4e-09 64.7 102 35.3
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.3e-09 64.3 102 36.3
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.3e-09 64.3 105 31.4
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.3e-09 64.3 106 38.7
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-08 63.5 106 34.9
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-08 63.5 106 34.9
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 1.9e-08 63.2 100 34.0
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.1e-08 62.0 102 36.3
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.1e-08 62.0 109 34.9
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.1e-08 62.0 106 35.8
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.4e-08 61.6 111 34.2
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.4e-08 61.6 100 30.0
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 5.4e-08 61.6 105 33.3
Potri.004G218101 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.1e-08 61.2 104 33.7
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 7.1e-08 61.2 104 36.5
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 9.2e-08 60.8 104 33.7
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 9.2e-08 60.8 115 33.9
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 9.2e-08 60.8 106 32.1
Gohir.D12G026700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-07 60.5 110 32.7
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 2.1e-07 59.7 83 37.3
Manes.07G021750 Manihot esculenta HOM05D016764 ORTHO05D001895 2.7e-07 59.3 62 48.4
Sabra01G0165000 Salix brachista HOM05D002599 ORTHO05D001895 3.5e-07 58.9 105 29.5
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.6e-07 58.5 95 36.8
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.0e-07 58.2 102 32.4
Gohir.A12G027200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.0e-07 58.2 107 31.8
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 6.0e-07 58.2 105 33.3
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 6.0e-07 58.2 105 33.3
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 6.0e-07 58.2 105 33.3
Gohir.D12G026733 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.8e-07 57.8 107 33.6
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 7.8e-07 57.8 105 33.3
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 7.8e-07 57.8 143 32.2
Gorai.008G027000 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.0e-06 57.4 94 35.1
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 1.0e-06 57.4 111 35.1
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-06 57.4 105 33.3
Gohir.A12G027266 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-06 57.0 107 33.6
Potri.003G017566 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-06 57.0 104 34.6
Atru.chr6.704 Acer truncatum HOM05D002599 ORTHO05D001895 1.7e-06 56.6 99 32.3
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-06 56.6 101 35.6
Thecc.05G107200 Theobroma cacao HOM05D002599 ORTHO05D025152 1.7e-06 56.6 117 31.6
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-06 56.2 107 33.6
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 2.3e-06 56.2 121 29.8
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.0e-06 55.8 98 34.7
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 3.0e-06 55.8 81 38.3
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.6e-06 54.7 107 33.6
Potri.015G016700 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.6e-06 54.7 107 32.7


User provided reference genes

Program Settings