Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0164100 Salix brachista HOM05D002599 ORTHO05D001895 7.7e-67 256.9 122 100.0
Potri.004G218101 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.9e-47 190.3 119 76.5
Sabra01G0165000 Salix brachista HOM05D002599 ORTHO05D001895 1.5e-46 189.5 109 84.4
Sabra01G0164500 Salix brachista HOM05D002599 ORTHO05D001895 7.5e-46 187.2 104 87.5
Sabra03G0008900 Salix brachista HOM05D002599 ORTHO05D001895 2.8e-40 168.7 119 67.2
Sabra03G0009500 Salix brachista HOM05D002599 ORTHO05D001895 8.1e-40 167.2 117 65.8
Sabra03G0009200 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-39 166.8 117 67.5
Sabra03G0009800 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-39 166.8 117 67.5
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 3.1e-39 165.2 117 65.0
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 4.0e-39 164.9 117 65.0
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 4.0e-39 164.9 117 65.0
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 4.0e-39 164.9 117 65.0
Sabra03G0008700 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-38 163.3 111 69.4
Potri.003G015900 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.4e-38 161.8 119 65.5
Potri.003G018400 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.6e-35 151.4 119 63.0
Potri.003G017566 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-34 149.1 119 62.2
Sabra03G0012300 Salix brachista HOM05D002599 ORTHO05D001895 3.2e-28 128.6 117 55.6
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 4.3e-17 91.7 116 40.5
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.8e-16 89.0 115 38.3
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 3.6e-16 88.6 115 38.3
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 6.2e-16 87.8 116 39.7
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-15 86.7 121 42.1
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 1.4e-15 86.7 112 37.5
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.0e-15 85.1 116 38.8
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.0e-15 85.1 116 38.8
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.0e-15 85.1 116 38.8
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 5.3e-15 84.7 113 41.6
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 5.3e-15 84.7 117 43.6
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 6.9e-15 84.3 117 36.8
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 9.0e-15 84.0 116 38.8
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-14 82.8 115 40.0
Potri.003G011250 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-14 82.8 116 34.5
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 7.6e-14 80.9 115 35.7
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 7.6e-14 80.9 110 40.9
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-13 80.1 118 33.9
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.7e-13 79.7 118 34.7
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.7e-13 79.7 114 38.6
Manes.10G122700 Manihot esculenta HOM05D002599 ORTHO05D001895 1.7e-13 79.7 112 39.3
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.9e-13 79.0 118 36.4
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.8e-13 78.6 114 37.7
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-12 77.0 115 35.7
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-12 76.6 116 33.6
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 3.2e-12 75.5 114 36.0
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.2e-12 75.1 116 31.9
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.2e-12 75.1 118 39.0
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.2e-12 75.1 119 33.6
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.6e-11 73.2 115 33.0
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.5e-11 72.0 119 33.6
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.6e-11 71.6 119 34.5
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.6e-11 71.6 118 37.3
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.6e-11 71.6 118 37.3
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.6e-11 71.6 110 30.9
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.0e-11 71.2 114 36.0
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.0e-11 71.2 114 36.0
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 6.0e-11 71.2 116 35.3
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-10 70.5 113 31.0
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.0e-10 70.5 113 31.0
Potri.004G220400 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.8e-10 69.7 122 32.0
Potri.004G220550 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.8e-10 69.7 122 32.0
Potri.004G220700 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.8e-10 69.7 122 32.0
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 2.3e-10 69.3 120 34.2
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 3.0e-10 68.9 119 30.3
Atru.chr13.1025 Acer truncatum HOM05D008353 ORTHO05D001895 3.9e-10 68.6 120 30.8
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 3.9e-10 68.6 115 30.4
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.1e-10 68.2 117 34.2
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 5.1e-10 68.2 116 32.8
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 5.1e-10 68.2 124 34.7
Gohir.D04G176568 Gossypium hirsutum HOM05D002599 ORTHO05D012670 6.7e-10 67.8 103 37.9
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.7e-10 67.8 118 32.2
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.7e-10 67.8 112 38.4
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 6.7e-10 67.8 115 30.4
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 6.7e-10 67.8 115 30.4
Sabra01G0167300 Salix brachista HOM05D008353 ORTHO05D001895 8.7e-10 67.4 120 32.5
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-09 67.0 102 36.3
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-09 67.0 115 29.6
Thecc.02G024900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-09 67.0 104 33.7
Atru.chr13.1023 Acer truncatum HOM05D008353 ORTHO05D001895 1.5e-09 66.6 120 30.0
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.9e-09 66.2 115 34.8
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.9e-09 66.2 119 32.8
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-09 66.2 116 31.9
COL.COLO4_17741 Corchorus olitorius HOM05D001654 ORTHO05D002773 2.5e-09 65.9 110 39.1
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 2.5e-09 65.9 108 37.0
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.5e-09 65.9 120 34.2
Thecc.02G091800 Theobroma cacao HOM05D008353 ORTHO05D001895 2.5e-09 65.9 115 30.4
Atru.chr3.613 Acer truncatum HOM05D002599 ORTHO05D001895 4.3e-09 65.1 114 37.7
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.3e-09 65.1 110 30.0
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.3e-09 65.1 120 33.3
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.3e-09 65.1 112 33.9
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 4.3e-09 65.1 107 36.4
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.4e-09 64.3 99 34.3
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 7.4e-09 64.3 117 32.5
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.4e-09 64.3 108 32.4
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 7.4e-09 64.3 120 32.5
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 9.6e-09 63.9 91 36.3
COL.COLO4_17753 Corchorus olitorius HOM05D002599 ORTHO05D001895 9.6e-09 63.9 115 29.6
Gohir.D04G176033 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.6e-09 63.9 99 34.3
Gohir.D04G176484 Gossypium hirsutum HOM05D002599 ORTHO05D029872 9.6e-09 63.9 103 37.9
Gohir.A04G133150 Gossypium hirsutum HOM05D002599 ORTHO05D029872 1.3e-08 63.5 104 37.5
Gohir.D04G176000 Gossypium hirsutum HOM05D019153 ORTHO05D047868 1.3e-08 63.5 108 36.1
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-08 63.5 85 37.6
Sabra15G0012600 Salix brachista HOM05D002599 ORTHO05D001895 1.3e-08 63.5 106 31.1
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-08 63.2 99 33.3
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.1e-08 62.8 114 29.8
Gorai.012G168700 Gossypium raimondii HOM05D002599 ORTHO05D029872 2.1e-08 62.8 102 36.3
Thecc.07G108400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.1e-08 62.8 116 31.9
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 2.8e-08 62.4 121 32.2
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 2.8e-08 62.4 119 32.8
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.7e-08 62.0 114 29.8
Gorai.012G169000 Gossypium raimondii HOM05D002599 ORTHO05D029872 4.8e-08 61.6 103 36.9
Sabra01G0166900 Salix brachista HOM05D008353 ORTHO05D001895 4.8e-08 61.6 119 28.6
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 4.8e-08 61.6 104 35.6
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 4.8e-08 61.6 113 32.7
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 6.2e-08 61.2 119 31.1
Gohir.A12G027233 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-07 60.5 105 33.3
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 1.1e-07 60.5 117 30.8
COL.COLO4_17754 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-07 60.1 98 32.7
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 1.4e-07 60.1 107 36.4
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.8e-07 59.7 88 38.6
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.8e-07 59.7 114 28.9
Gohir.A12G027266 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.8e-07 59.7 105 33.3
Gohir.D04G176554 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-07 58.9 104 33.7
Thecc.02G092000 Theobroma cacao HOM05D008353 ORTHO05D001895 4.0e-07 58.5 115 27.8
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 5.3e-07 58.2 122 25.4
COL.COLO4_11748 Corchorus olitorius HOM05D008353 ORTHO05D001895 5.3e-07 58.2 119 31.1
Gohir.D04G176470 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.3e-07 58.2 102 34.3
Thecc.02G091500 Theobroma cacao HOM05D008353 ORTHO05D001895 5.3e-07 58.2 115 27.8
COL.COLO4_11744 Corchorus olitorius HOM05D002599 ORTHO05D001895 6.9e-07 57.8 81 39.5
Atru.chr8.2426 Acer truncatum HOM05D008353 ORTHO05D001895 9.0e-07 57.4 118 26.3
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-06 57.0 109 27.5
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 1.5e-06 56.6 109 33.9
Gohir.D04G176200 Gossypium hirsutum HOM05D002599 ORTHO05D012670 2.0e-06 56.2 102 30.4
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-06 56.2 106 30.2
Gohir.A04G132600 Gossypium hirsutum HOM05D002599 ORTHO05D012670 2.6e-06 55.8 102 30.4
Gohir.D02G213400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-06 55.8 86 33.7
Manes.07G021400 Manihot esculenta HOM05D008353 ORTHO05D001895 3.4e-06 55.5 116 26.7
Gohir.D02G213300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.5e-06 55.1 86 33.7
Prupe.1G574200 Prunus persica HOM05D002599 ORTHO05D001895 1.0e-05 53.9 106 32.1


User provided reference genes

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