Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 0.0e+00 1183.3 638 100.0
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 7.4e-161 571.6 590 60.8
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 3.5e-78 297.0 675 38.5
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 8.2e-43 179.5 715 31.0
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 1.1e-42 179.1 300 43.3
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 2.5e-39 167.9 623 31.9
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 1.0e-37 162.5 627 31.7
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 3.0e-37 161.0 652 31.7
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 2.6e-36 157.9 657 31.4
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 1.1e-34 152.5 360 38.3
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.8e-34 151.8 682 28.7
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.8e-34 151.8 704 28.3
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 7.0e-34 149.8 612 28.6
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 2.6e-33 147.9 631 28.7
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 4.5e-33 147.1 819 28.3
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 3.8e-32 144.1 307 39.7
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 5.0e-32 143.7 718 27.9
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 8.5e-32 142.9 700 28.4
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 2.5e-31 141.4 639 31.8
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 2.6e-28 131.3 346 37.6
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 7.5e-28 129.8 617 29.5
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 1.6e-25 122.1 668 28.4
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 1.6e-25 122.1 698 26.9
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 2.0e-25 121.7 727 27.0
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 3.8e-24 117.5 387 35.9
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 8.5e-24 116.3 749 28.3
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 1.5e-23 115.5 337 34.4
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 5.5e-23 113.6 632 28.3
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 9.4e-23 112.8 627 28.4
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 1.4e-21 109.0 308 32.8
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 1.8e-21 108.6 596 26.7
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 4.4e-20 104.0 359 32.6
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 5.7e-20 103.6 256 38.7
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 1.7e-19 102.1 362 33.4
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 4.8e-19 100.5 798 24.6
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 5.4e-18 97.1 595 29.1
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 9.1e-18 96.3 343 30.9
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 1.3e-16 92.4 653 26.5
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 1.7e-16 92.0 219 38.4
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 3.8e-16 90.9 256 35.9
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 8.6e-16 89.7 211 39.3
DCAR_023083 Daucus carota HOM05D008208 ORTHO05D010143 5.5e-15 87.0 232 34.5
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 1.2e-14 85.9 689 25.4
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 1.0e-13 82.8 419 28.6
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 1.0e-13 82.8 638 26.3
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 2.3e-13 81.6 639 26.9
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 5.2e-13 80.5 239 34.7
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 4.4e-12 77.4 336 31.0
MBI04_g07011_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 4.4e-12 77.4 642 25.7
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 9.8e-12 76.3 789 22.4
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 9.8e-12 76.3 260 32.7
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 2.2e-11 75.1 272 30.1
ECA232G2142 Erigeron canadensis HOM05D008208 ORTHO05D010143 4.9e-11 73.9 323 30.7
SalBow2G3317 Salvia bowleyana HOM05D008208 ORTHO05D010143 6.3e-11 73.6 310 28.7
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 1.1e-10 72.8 679 25.3
SGA_v2.0_scaffold265G46060 Striga asiatica HOM05D008208 ORTHO05D010143 9.2e-10 69.7 338 28.4
Eucgr.F03082 Eucalyptus grandis HOM05D008208 ORTHO05D010143 1.2e-09 69.3 651 24.7
Lsat_1_v5_gn_5_134320 Lactuca sativa HOM05D008208 ORTHO05D010143 4.5e-09 67.4 342 27.5
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 4.5e-09 67.4 234 32.1
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 1.0e-08 66.2 640 25.6
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 2.3e-08 65.1 368 28.8
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 5.0e-08 63.9 307 27.0
Aqoxy1G02121 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 6.6e-08 63.5 198 31.8
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 3.3e-07 61.2 420 25.5
CDE05G0720 Ceratophyllum demersum HOM05D008208 ORTHO05D010143 4.3e-07 60.8 129 33.3
PGR102G1678 Punica granatum HOM05D008208 ORTHO05D010143 7.3e-07 60.1 127 35.4
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 2.1e-06 58.5 221 29.0


User provided reference genes

Program Settings