Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 2.5e-77 292.0 138 100.0
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 2.3e-30 136.0 129 52.7
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 1.5e-29 133.3 129 52.7
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 4.2e-29 131.7 75 76.0
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 1.2e-28 130.2 129 51.2
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 4.7e-28 128.3 124 52.4
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 6.1e-28 127.9 129 50.4
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 8.0e-28 127.5 129 50.4
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 1.0e-27 127.1 70 77.1
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 1.4e-27 126.7 129 49.6
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 1.4e-27 126.7 124 50.8
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 1.4e-27 126.7 70 77.1
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 1.4e-27 126.7 129 48.8
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 2.3e-27 125.9 129 49.6
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 3.0e-27 125.6 124 50.0
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 3.0e-27 125.6 129 48.1
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 3.0e-27 125.6 144 44.4
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 3.0e-27 125.6 70 74.3
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 3.0e-27 125.6 70 74.3
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 3.0e-27 125.6 70 74.3
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 3.0e-27 125.6 70 72.9
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 4.0e-27 125.2 75 72.0
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 4.0e-27 125.2 70 72.9
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 4.0e-27 125.2 70 74.3
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 5.2e-27 124.8 70 72.9
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 5.2e-27 124.8 129 48.1
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 6.8e-27 124.4 128 49.2
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 6.8e-27 124.4 124 48.4
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 8.9e-27 124.0 119 52.1
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 8.9e-27 124.0 129 50.4
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 1.2e-26 123.6 75 69.3
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 1.5e-26 123.2 123 51.2
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 1.5e-26 123.2 124 46.8
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 1.5e-26 123.2 138 50.0
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 2.0e-26 122.9 75 68.0
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 2.0e-26 122.9 123 48.8
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 2.0e-26 122.9 70 72.9
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 2.0e-26 122.9 70 72.9
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 2.0e-26 122.9 70 71.4
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 2.0e-26 122.9 75 64.0
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 2.6e-26 122.5 124 50.8
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 2.6e-26 122.5 124 46.8
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 2.6e-26 122.5 75 69.3
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 2.6e-26 122.5 70 72.9
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 2.6e-26 122.5 124 48.4
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 2.6e-26 122.5 70 71.4
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 3.4e-26 122.1 129 48.1
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 3.4e-26 122.1 70 71.4
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 3.4e-26 122.1 129 48.1
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 3.4e-26 122.1 70 72.9
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 3.4e-26 122.1 125 49.6
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 4.4e-26 121.7 70 72.9
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 4.4e-26 121.7 75 68.0
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 5.7e-26 121.3 82 69.5
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 5.7e-26 121.3 67 74.6
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 5.7e-26 121.3 124 48.4
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 7.5e-26 120.9 124 48.4
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 7.5e-26 120.9 75 69.3
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 7.5e-26 120.9 70 70.0
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 7.5e-26 120.9 70 71.4
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 7.5e-26 120.9 75 69.3
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 7.5e-26 120.9 123 49.6
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 9.8e-26 120.6 124 48.4
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 1.3e-25 120.2 124 48.4
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 1.3e-25 120.2 129 48.8
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 1.3e-25 120.2 129 48.8
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 1.3e-25 120.2 129 48.8
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 1.3e-25 120.2 129 46.5
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 1.7e-25 119.8 119 50.4
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 1.7e-25 119.8 75 68.0
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 2.2e-25 119.4 123 52.0
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 2.2e-25 119.4 129 46.5
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 2.2e-25 119.4 75 66.7
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 2.2e-25 119.4 129 48.8
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 3.7e-25 118.6 75 72.0
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 3.7e-25 118.6 119 49.6
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 4.9e-25 118.2 124 46.8
Hund00584 Selenicereus undatus HOM05D004738 ORTHO05D006439 4.9e-25 118.2 71 69.0
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 8.3e-25 117.5 124 46.8
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 8.3e-25 117.5 124 46.0
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 8.3e-25 117.5 70 67.1
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 8.3e-25 117.5 74 64.9
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 1.1e-24 117.1 70 70.0
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 1.4e-24 116.7 70 70.0
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 1.4e-24 116.7 70 70.0
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 1.4e-24 116.7 70 70.0
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 1.4e-24 116.7 70 70.0
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 1.4e-24 116.7 70 70.0
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 1.4e-24 116.7 129 45.7
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 1.4e-24 116.7 75 66.7
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 1.4e-24 116.7 129 48.8
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.8e-24 116.3 82 62.2
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 2.4e-24 115.9 75 66.7
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 3.2e-24 115.5 70 68.6
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 3.2e-24 115.5 70 67.1
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 3.2e-24 115.5 75 66.7
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 3.2e-24 115.5 75 66.7
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 4.1e-24 115.2 70 67.1
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 5.4e-24 114.8 70 65.7
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 5.4e-24 114.8 119 47.9
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 5.4e-24 114.8 75 65.3
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 7.0e-24 114.4 70 67.1
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 7.0e-24 114.4 70 67.1
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 7.0e-24 114.4 70 67.1
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 7.0e-24 114.4 70 67.1
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 7.0e-24 114.4 70 67.1
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 7.0e-24 114.4 124 44.4
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 7.0e-24 114.4 75 62.7
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 7.0e-24 114.4 75 62.7
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 9.2e-24 114.0 70 68.6
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 9.2e-24 114.0 70 68.6
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 1.2e-23 113.6 70 67.1
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 1.2e-23 113.6 70 67.1
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 1.2e-23 113.6 70 67.1
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 1.2e-23 113.6 129 43.4
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 1.2e-23 113.6 70 68.6
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 1.2e-23 113.6 70 68.6
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 1.6e-23 113.2 70 67.1
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 1.6e-23 113.2 124 44.4
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.0e-23 112.8 65 69.2
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 2.7e-23 112.5 70 65.7
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 3.5e-23 112.1 75 65.3
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 7.8e-23 110.9 70 64.3
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 2.3e-22 109.4 70 64.3
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 3.9e-22 108.6 94 54.3
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 5.0e-22 108.2 74 58.1
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 1.0e-19 100.5 75 54.7
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 1.8e-19 99.8 75 52.0
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 2.2e-17 92.8 70 54.3
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 2.4e-16 89.4 84 50.0
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 1.6e-15 86.7 70 47.1
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 2.0e-15 86.3 90 42.2
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 4.6e-15 85.1 71 47.9
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 3.3e-13 79.0 99 44.4
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 1.2e-12 77.0 79 40.5
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 1.2e-12 77.0 79 40.5
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 4.7e-12 75.1 37 75.7
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 8.1e-12 74.3 65 50.8
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 8.9e-11 70.9 91 39.6
Nn1g05393 Nelumbo nucifera HOM05D004738 ORTHO05D280673 7.1e-08 61.2 33 66.7
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 2.1e-07 59.7 68 44.1


User provided reference genes

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